Mageck mle calculates beta scores from 0 counts

davidliwei / mageck

Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)

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Mageck mle calculates beta scores from 0 counts #9

Open JH1606-code opened 1 year ago

JH1606-code commented 1 year ago

Hi,

I run mageck mle on my data. Here I saw that mageck mle calculates beta scores for genes which have 0 counts from mageck count in all conditions. How could this be?

I would be happy about a feedback!