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davidpng / FCS_Database

Program to scrape an FCS directory of metadata
GNU General Public License v3.0
3 stars 2 forks source link

Viz dev 06 #23

Closed hermands closed 9 years ago

hermands commented 9 years ago

I checked out github version. It passes ./testall

I am guessing you haven't pushed some code?

Let me know what you think.

davidpng commented 9 years ago

AssertionError: Not equal to tolerance rtol=0.001, atol=0 Results are more different than tolerable (mismatch 100.0%) x: array([[ 0.294518, 0.795303], [ 0.326271, 0.448472], [ 0.42173 , 0.898543], [ 0.257519, 0.79198 ]], dtype=float32) y: array([[ 0.294518, 0.204699], [ 0.326271, 0.551533], [ 0.42173 , 0.101467], [ 0.257519, 0.208028]], dtype=float32)

Ran 7 tests in 12.695s

FAILED (failures=2, errors=1)

I'm still getting two failures one from the autocomp system that I didn't get working and the other from test_process

I just pulled the code from github. Checked out the right branch?

David

On Thu, Dec 18, 2014 at 11:09 AM, Daniel Herman notifications@github.com wrote:

Assigned #23 https://github.com/davidpng/FCS_Database/pull/23 to @davidpng https://github.com/davidpng.

— Reply to this email directly or view it on GitHub https://github.com/davidpng/FCS_Database/pull/23#event-209769570.

hermands commented 9 years ago

Ah. I probably didn't merge the latest version onto my local. Oops. -Dan

On Dec 18, 2014, at 1:11 PM, David Ng notifications@github.com wrote:

AssertionError: Not equal to tolerance rtol=0.001, atol=0 Results are more different than tolerable (mismatch 100.0%) x: array([[ 0.294518, 0.795303], [ 0.326271, 0.448472], [ 0.42173 , 0.898543], [ 0.257519, 0.79198 ]], dtype=float32) y: array([[ 0.294518, 0.204699], [ 0.326271, 0.551533], [ 0.42173 , 0.101467], [ 0.257519, 0.208028]], dtype=float32)

Ran 7 tests in 12.695s

FAILED (failures=2, errors=1)

I'm still getting two failures one from the autocomp system that I didn't get working and the other from test_process

I just pulled the code from github. Checked out the right branch?

David

On Thu, Dec 18, 2014 at 11:09 AM, Daniel Herman notifications@github.com wrote:

Assigned #23 https://github.com/davidpng/FCS_Database/pull/23 to @davidpng https://github.com/davidpng.

— Reply to this email directly or view it on GitHub https://github.com/davidpng/FCS_Database/pull/23#event-209769570.

— Reply to this email directly or view it on GitHub.

Daniel Herman, M.D., Ph.D. Laboratory Medicine Resident, PGY2 Office: (206) 598-0254 Cell: (914) 960-1004 hermands@uw.edu

hermands commented 9 years ago

TODO: I need to fix my handling of Antigens (Decide whether to allow null or to remove the null row in Python)....

hermands commented 9 years ago

I merged this over to IO-dev (because it was not stable and wanted to merge developments)

22935bf Merge branch 'viz-dev-06' into IO-dev