Io dev 2 - Githubissues

davidpng / FCS_Database

Program to scrape an FCS directory of metadata

GNU General Public License v3.0

3 stars 2 forks source link

Io dev 2 #27

Closed hermands closed 9 years ago

hermands commented 9 years ago

I merged tests2csv atop this.

Please review and add this atop master. Then I will continue to build IO.

-Dan

davidpng commented 9 years ago

I need permission to get your hsqr bitbucket for the enviroment or the right key. Not sure how to do that but the tests are all failing because hsqr can not be loaded.

hermands commented 9 years ago

Sorry about that. I have added write permissions for you and read for uwlabmed groups.

If there is a key required it should be however you interact with bitbucket.

hermands commented 9 years ago

You should be able to run

pip -e git+ssh://git@bitbucket.org/hermands/hsqr.git@flow-dev#egg=hsqr [after activating the environment (rather than install a full new virtual env)]

I haven't done this enough to make all work...I think it will checkout the correct branch automatically of hsqr, but you may have to (or at least check the branch of hsqr (flow_anal-env/src/hsqr/):

cd flow_anal-env/src/hsqr
git checkout flow-dev

davidpng commented 9 years ago

I got it working after downloading your hsqr git and installing the venv.

Do you still want me to merge or do you want to keep on working on this?

David

On Sun, Dec 28, 2014 at 10:07 AM, Daniel Herman notifications@github.com wrote:

You should be able to run: pip "-e ...." after activating the environment (rather than install a full new virtual env).

I haven't done this enough to make all work...

I think it will checkout the correct branch automatically of hsqr, but you may have to:

cd flow_anal-env/src/hsqr

git checkout flow-dev

— Reply to this email directly or view it on GitHub https://github.com/davidpng/FCS_Database/pull/27#issuecomment-68214377.

hermands commented 9 years ago

I guess this also means that I will have to alert you whenever hsqr@flow-dev needs to be re-pulled

hermands commented 9 years ago

If IO-dev-2 is working, please merge into master. Then create a new branch for new feature atop new master. (My IO-dev-3 is built atop IO-dev-2, which you will make master).

If flow_anal-env/src/hsqr/ has a different branch checked out than flow-dev, please change to flow-dev and let me know. (Master is stable, but very different from flow-dev; not sure if it would pass current tests)

davidpng commented 9 years ago

/src/hsqr is currently on flow-dev.

I have merged IO-Dev-2 into master and closed it.

David