[ ] Start two seeds of simulations with high mutation rate (10x, 100x normal rate)
[ ] Start experiments for two seeds with rearrangements also set to 10x normal rate, with mutation rates at 10x
[ ] Check the raw data to find out whether the values are actually changing or whether it's some kind of a graphing problem
[ ] Use aevol post-treatments to find the fixed mutation rate for the lineage of the best individual
[ ] Use aevol post-treatments to find robustness
[ ] Check in stat_mutation_best if mutations are actually happening at a higher rate in the mut_up condition. Sum over the columns, and compare to the control condition.
[ ] Continue to fill out table with expectations from A Long-Term Evolutionary Pressure on the Amount of Noncoding DNA
[x] Continue to fill out work log as work is completed, not after the fact
[ ] Graph the number of mutations over time
[ ] Create presentation for Monday, 4 Nov.
[x] What have I done so far?
[x] What is still to do?
[x] Prepare a detailed schedule for the next 4 weeks
[ ] Can I identify any hypothesis from the data?
[x] Copy all "stats" directories for different seeds to my laptop
Brian's To Do