Meeting Log 31-05-19

[davisbk]

General Notes

• Set up aevol on bwCloud
• Improved Brian's limits on bwCloud
• Sent technical question to Prof. Beslon re: aevol crashing after 14 iterations

Brian's To Do

• [X] Install Visual Studio to look at the C++ code of aevol
• [x] Complete first aevol experiment
  • [X] Use best_last_org.txt to create a clonal population of the best wild type and let them evolve for 10,000 generations.
  • [x] Figure out which statistics can be generated by aevol
  • [ ] Use aevol's plots to graph the data
  • [x] Write a short paragraph about each of the post-treatments
• [X] Write down all of the commands used to set up aevol
  Click to expand commands used to set up aevol

  #DEPENDENCIES

Build tools

apt install build-essential or dnf install gcc-c++

compression library

apt install zlib1g-dev

boost library

apt install libboost-filesystem-dev

libtoolize

sudo apt-get install libtool m4 automake

CONFIGURE

autoreconf ./configure --without-x

COMPILE AND INSTALL

make

do NOT do make install if multiple versions are installed

sudo make install