davisking / dlib

A toolkit for making real world machine learning and data analysis applications in C++
http://dlib.net
Boost Software License 1.0
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[Bug]: cluster wrong #2829

Open fatalfeel opened 1 year ago

fatalfeel commented 1 year ago

What Operating System(s) are you seeing this problem on?

Linux (x86-64)

dlib version

19.24.2

Python version

3.7

Compiler

gcc (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0

Expected Behavior

refer to : https://github.com/davisking/dlib/discussions/2821

Current Behavior

refer to : https://github.com/davisking/dlib/discussions/2821

Steps to Reproduce

include "dlib/clustering.h"

include "dlib/string.h"

using namespace dlib; using namespace std;

bool compareOriginDistance(std::vector v0, std::vector v1) { double summary; double distance0; double distance1;

summary = 0;
for(auto& vit : v0)
    summary += vit*vit;
distance0 = std::sqrt(summary);

summary = 0;
for(auto& vit : v1)
    summary += vit*vit;
distance1 = std::sqrt(summary);

return distance0 < distance1;

}

double Vector3Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<3; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

// ----------------------------------------------------------------------------------------

int main(int argc, char* argv) { int count; bool bFound; int idx_current; int groupIndex; double distance; unsigned long clusterNum; std::unordered_map<int, std::vector> groupMap; std::vector numlabel; std::vector numpair; double elapsed; struct timespec t1, t2; /std::vector<std::vector> vectorXYZ = { {13.1, 13.1, 13.1}, {8.3, 8.3, 8.3}, {1.1, 1.1, 1.1}, {2.2, 2.2, 2.2}, {7, -7, 7}, {-8.2, -8.2, -8.2}, {12, 12, 12}, {7.6, 7.6, 7.6}, {13.2, 13.2, 13.2}, {13.3, 13.3, 13.3}, {8.1, 8.1, 8.1}, {1.6, 1.6, 1.6}, {2.35, 2.35, 2.35}, {7.5, -7.5, 7.5}, {-8.15, -8.15, -8.15}, {12, 12, 12}, {7.6, 7.6, 7.6}, {13, 13, 13}, {13.2, 13.2, 13.2}, {13.6, 13.6, 13.6} };*/

std::vector<std::vector<double>> vectorXYZ =
{
 {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
 {-0.122809, 0.141884, 0.0834277, -0.024698, 0.0177337, -0.0565662, -0.0488287, -0.167187, 0.129479, -0.16477, 0.235103, 0.0143175, -0.190848, -0.17434, 0.0239052, 0.109071, -0.1412, -0.152348, -0.130039, 0.00932468, 0.0635409, -0.0535787, 0.0321519, -0.0552175, -0.125623, -0.415993, -0.142093, -0.0782209, -0.0423333, -0.0628295, -0.00478314, -0.0147723, -0.208385, -0.097194, -0.0340456, 0.0250795, 0.0476099, 0.0445404, 0.155967, -0.0330071, -0.211093, 0.0635749, 0.0551622, 0.248809, 0.217021, -0.00950041, 0.0644111, -0.0741558, 0.130536, -0.150162, 0.0454363, 0.0712427, 0.181238, 0.0244739, 0.1227, -0.0829122, 0.0271064, 0.107598, -0.178865, 0.0838384, 0.130686, -0.0890263, -0.0846723, 0.0443754, 0.116611, 0.0607178, -0.0848899, -0.158509, 0.175877, -0.091944, 0.0752838, 0.064769, -0.13667, -0.209451, -0.278074, 0.0388157, 0.396069, 0.0985305, -0.187861, 0.00272873, -0.115045, 0.00759091, 0.0929476, -0.0135563, -0.053188, 0.0110131, -0.108069, 0.113875, 0.196847, 0.0363506, -0.0278321, 0.190228, -0.016135, -0.0186574, 0.0398624, 0.0430936, -0.0728235, 0.0186825, -0.169696, 0.0589708, 0.0177984, -0.132982, -0.0278657, 0.0477713, -0.150841, 0.1162, 0.0068371, 0.0412291, -0.0295409, 0.021594, -0.11953, -0.0136774, 0.109455, -0.217901, 0.175909, 0.194058, -0.0119731, 0.0930409, 0.0532424, 0.0303565, -0.0040981, -0.0295382, -0.186952, -0.0768026, 0.0278174, -0.0122376, 0.0969743, 0.00307787},
 {-0.130142, 0.107555, 0.0572895, -0.0845698, -0.12549, -0.034339, -0.0467723, -0.164135, 0.145387, -0.146743, 0.174315, -0.0318005, -0.172607, -0.101449, -0.0940405, 0.177059, -0.135336, -0.148106, -0.056861, -0.0382697, 0.102158, 0.0209301, 0.0115177, 0.0100246, -0.13297, -0.326479, -0.133685, -0.081091, 0.0400336, -0.0240793, -0.0405149, -0.00885114, -0.233745, -0.0830078, 0.0250101, 0.043742, -0.0131077, -0.0413116, 0.166192, 0.0131113, -0.23724, 0.0351128, 0.0428485, 0.222982, 0.194576, 0.0199175, 0.0339355, -0.113281, 0.15135, -0.11284, 0.0723526, 0.113935, 0.122559, 0.0563529, 0.0387194, -0.0898886, 0.0267035, 0.191483, -0.1494, 0.0588322, 0.123158, -0.0707478, -0.00723561, -0.0496402, 0.168517, 0.0651333, -0.083626, -0.184424, 0.201588, -0.146728, -0.0284528, 0.0278722, -0.145421, -0.157506, -0.274791, 0.0225294, 0.380545, 0.194099, -0.185368, -0.0184206, -0.0614196, 0.038362, 0.138265, 0.085994, -0.0319764, 0.0302294, -0.0496441, -0.00648053, 0.249367, -0.00993198, -0.0543855, 0.253636, 0.00113154, 0.0443343, 0.012549, -0.0368349, -0.101751, 0.00487958, -0.127768, -0.00746846, -0.0324014, -0.0477133, 0.00651821, 0.147431, -0.126395, 0.144034, -0.0331465, 0.062365, -0.0841882, 0.0184607, -0.115114, -0.0362254, 0.121352, -0.120006, 0.229884, 0.172513, 0.0578926, 0.0942701, 0.154926, 0.0281702, 0.0246513, -0.039883, -0.181112, -0.0562719, 0.131885, -0.0961102, 0.153769, 0.0120704},
 {-0.127858, 0.00730303, 0.00490271, -0.107261, -0.0890459, -0.0941798, -0.00644781, -0.21063, 0.1624, -0.148379, 0.236062, -0.112629, -0.174543, -0.108475, -0.0577822, 0.196871, -0.279764, -0.159019, -0.0259959, -0.0225946, 0.0128491, -0.00963796, 0.0674975, 0.0790626, -0.153605, -0.419052, -0.112466, -0.0768207, -0.000853801, -0.00158204, 0.0379006, 0.177633, -0.224044, -0.0595616, -0.00961656, 0.0900579, 0.0370869, -0.0527091, 0.207512, -0.00724315, -0.270678, 0.047113, 0.0788909, 0.263494, 0.133682, 0.011274, 0.0134011, -0.050655, 0.0874453, -0.142138, -0.00569062, 0.0728319, 0.0604688, -0.0604389, -0.022393, -0.109376, 0.0239777, 0.129457, -0.205887, -0.00965135, 0.096523, -0.124476, 0.0079135, -0.0407708, 0.194015, 0.0873009, -0.080362, -0.117395, 0.170097, -0.121238, -0.036494, 0.00980805, -0.130165, -0.158267, -0.338711, -0.0192549, 0.384294, 0.026719, -0.110668, 0.058778, -0.00929742, -0.0161355, 0.0912385, 0.11896, -0.0695814, 0.0216341, -0.107535, 0.0196625, 0.202385, 0.0362525, -0.0565165, 0.212705, -0.0300995, -0.00490006, 0.060506, 0.0280855, -0.0950138, 0.0540323, -0.135612, 0.0492903, 0.0463888, -0.0672418, -0.0231786, 0.124676, -0.185619, 0.130382, -0.0234665, -0.0223005, 0.0139654, 0.0438819, -0.065526, -0.0671872, 0.107503, -0.217735, 0.136946, 0.198381, 0.0595057, 0.179289, 0.0797474, 0.0293032, -0.0526457, 0.0394151, -0.231285, -0.0642926, 0.129709, -0.0697159, 0.156028, 0.0535734},
 {-0.0905051, 0.00163369, 0.0535583, -0.0640821, -0.0805288, -0.0890661, -0.0340162, -0.192739, 0.164495, -0.113413, 0.233835, -0.0779192, -0.189857, -0.0858655, -0.0487517, 0.147014, -0.215897, -0.103606, -0.0712985, 0.00700117, 0.0668264, -0.0235734, 0.0690326, 0.026202, -0.115898, -0.384459, -0.112881, -0.0905679, -0.0153887, 0.0114962, -0.0201105, 0.0714012, -0.183783, -0.0746448, 0.024892, 0.0457105, -0.0202484, -0.0655856, 0.200638, -0.0854433, -0.312505, -0.00825135, 0.0735555, 0.170051, 0.175302, -0.00497253, 0.00517798, -0.129615, 0.167219, -0.142599, 0.00237514, 0.138755, 0.0646658, 0.00675762, 0.00139385, -0.0837034, 0.00909007, 0.170721, -0.144759, -0.0197719, 0.133594, -0.136821, -0.0325649, -0.0840999, 0.140316, 0.0897723, -0.101888, -0.181625, 0.128187, -0.146947, -0.003121, 0.0648141, -0.162793, -0.21874, -0.270899, -0.0528614, 0.349046, 0.0430693, -0.147338, 0.0151391, -0.0933118, 0.038197, 0.138434, 0.118174, 0.0280101, 0.0494065, -0.101154, -0.0237216, 0.215073, -0.0925647, 0.0155855, 0.242506, -0.0163804, 0.0374359, 0.0312551, 0.0249686, -0.0933276, 0.0633129, -0.158089, 0.0590632, 0.0240139, -0.0138454, 0.0238764, 0.0534265, -0.127014, 0.103142, 0.00471741, 0.0667835, 0.0666634, -0.0687426, -0.047581, -0.138089, 0.12435, -0.185108, 0.148363, 0.140487, 0.0554305, 0.150784, 0.0657144, 0.0799364, -0.0527384, -0.012457, -0.229388, 0.026468, 0.105851, -0.0175102, 0.0516422, -0.0365241},
 {-0.137728, 0.132228, 0.0459142, 0.00797745, -0.120738, -0.022173, -0.0488161, -0.161654, 0.0541456, 0.0183052, 0.269579, -0.107488, -0.324014, 0.0163161, -0.12478, 0.0983449, -0.14433, -0.100667, -0.0710296, -0.059846, 0.00477455, -0.0325038, 0.0111534, 0.0370959, -0.0106259, -0.333755, -0.0589816, -0.103582, 0.111262, -0.110681, -0.00864846, 0.00292839, -0.11085, -0.102033, 0.0289328, 0.115192, -0.0372389, -0.0642154, 0.282596, -0.0711618, -0.103423, -0.013593, 0.0666339, 0.295447, 0.137473, 0.0907247, 0.0229842, -0.0488636, 0.0786334, -0.277129, 0.0850812, 0.169264, 0.158768, 0.0390769, 0.0779419, -0.158195, -0.0221697, 0.0890846, -0.122131, 0.0262215, 0.0937135, 0.0022936, -0.0358059, -0.102401, 0.179279, 0.0815198, -0.0529744, -0.0701297, 0.203933, -0.150615, -0.105924, -0.0132928, -0.0896192, -0.124213, -0.239991, 0.0507977, 0.387855, 0.137262, -0.170002, 0.00837796, -0.0165664, -0.0545538, 0.0435606, -0.0448073, -0.0888326, -0.0351871, -0.127447, -0.00881629, 0.158357, -0.0552326, 0.00831018, 0.137581, 0.0269404, 0.0386932, 0.0934804, 0.0723945, -0.0757106, 0.0100709, -0.171715, 0.00957492, 0.113146, -0.0545902, 0.0441366, 0.098829, -0.188906, 0.082529, -0.0242792, -0.0354512, 0.0372229, 0.01404, -0.094255, -0.0364086, 0.248493, -0.215333, 0.17409, 0.201649, -0.0291437, 0.077616, 0.0844647, 0.0370994, 0.0564283, 0.0103035, -0.18739, -0.177614, 0.00648249, -0.0226764, -0.0624888, 0.0667067},
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 {-0.103675, -0.00902967, 0.0886965, -0.0629106, -0.148368, -0.0411439, -0.0903141, -0.0860361, 0.113856, -0.133959, 0.195001, -0.00343702, -0.20236, -0.089966, 0.0102875, 0.193926, -0.156649, -0.139994, -0.0766978, 0.0207421, 0.017722, -0.0518512, 0.0896239, 0.0424407, -0.0857871, -0.435325, -0.156875, -0.0851204, -0.0179105, -0.0222757, -0.0223042, 0.0212303, -0.147043, -0.00950308, 0.021716, 0.0677671, 0.00729428, -0.0744113, 0.218437, 0.0299665, -0.259256, -0.00559629, -0.0221932, 0.221645, 0.197571, 0.0540162, 0.129179, -0.0691209, 0.130851, -0.201743, 0.145827, 0.151018, 0.110849, -0.00355136, 0.0437294, -0.101635, 0.0708236, 0.152898, -0.137978, 0.0764649, 0.109487, -0.0877454, 0.0108832, -0.0295854, 0.208257, 0.116412, -0.114388, -0.189839, 0.103923, -0.145176, -0.0555605, -0.0198714, -0.243689, -0.187766, -0.375037, 6.25271e-05, 0.390533, 0.127642, -0.20753, -0.00417701, -0.0776771, 0.00891775, 0.078406, 0.171265, -0.0482232, -0.00410104, -0.124106, 0.0113852, 0.224745, -0.0777664, -0.0338375, 0.228549, -0.00425648, 0.0343941, -0.00270032, 0.0196073, -0.0524804, 0.0131976, -0.0671436, 0.0273094, 0.0303408, -0.0424803, 0.00281042, 0.0681205, -0.207095, 0.125405, -0.0802642, 0.0229189, -0.0225285, -0.0167644, -0.162142, -0.0834405, 0.156386, -0.148826, 0.179134, 0.260977, 0.0843175, 0.1224, 0.128569, 0.0897419, -0.00809737, 0.00235723, -0.155397, -0.00520696, 0.0534629, 0.00309893, 0.077896, 0.0641631},
 {-0.124044, 0.0665784, 0.0726742, -0.0141981, -0.0944122, -0.0809962, -0.0668627, -0.106913, 0.071515, -0.0634828, 0.218688, -0.0620165, -0.214799, -0.0935997, 0.00727349, 0.141698, -0.1396, -0.141151, -0.110632, -0.0287336, 0.0428804, -0.097886, 0.0385697, 0.0355252, -0.119797, -0.340771, -0.0955691, -0.0284905, 0.0306421, -0.087176, -0.0127802, 0.0681527, -0.149921, -0.0719135, 0.0341622, 0.110124, -0.0462397, -0.0664079, 0.237888, -0.0566891, -0.223975, 0.0796179, 0.0552901, 0.255369, 0.270337, 0.059794, 0.0152771, -0.0661211, 0.133896, -0.255806, 0.0646892, 0.175682, 0.118115, 0.0647035, 0.0271185, -0.151306, 0.0497166, 0.195678, -0.178162, 0.0322681, 0.082366, -0.141681, -0.0215201, -0.0783836, 0.201545, 0.166687, -0.149195, -0.16452, 0.112168, -0.127937, -0.0811235, 0.000125739, -0.169801, -0.169963, -0.349993, 0.0510402, 0.370592, 0.143114, -0.227632, 0.0202726, -0.0270136, 0.0351103, 0.0611532, 0.0998548, -0.126872, -0.0769851, -0.104614, -0.0367721, 0.169986, 0.0215219, -0.0699793, 0.161853, 0.00917404, 0.072177, 0.0383152, 0.0135769, -0.109716, -0.0032642, -0.179689, -0.0182382, 0.0187972, -0.0727538, 0.0254519, 0.125796, -0.152736, 0.186446, -0.0308193, 0.0651957, -0.0078939, 0.0151191, -0.094278, 0.0150518, 0.115126, -0.228935, 0.244639, 0.222483, 0.108484, 0.111915, 0.204119, 0.052492, 0.0181312, 0.0754944, -0.178814, -0.0374557, 0.0718218, -0.0248205, 0.120559, 0.0657052},
 {-0.0916301, 0.0743129, 0.0741697, 0.00337872, -0.0954873, -0.0721012, -0.0803096, -0.136819, 0.0629979, -0.0762493, 0.248069, -0.0547102, -0.180226, -0.148588, 0.0277657, 0.144394, -0.143602, -0.112268, -0.0392452, 0.0219722, 0.0801767, -0.0435615, 0.11222, 0.0477832, -0.17988, -0.405011, -0.0831553, -0.100603, -0.0408181, -0.0702085, -0.0263202, 0.108104, -0.148659, -0.0268779, 0.005535, 0.0877085, -0.0116396, -0.0388273, 0.240434, -0.0196645, -0.255398, -0.0149732, 0.00379848, 0.256487, 0.197436, -0.0274119, 0.0936544, -0.0428689, 0.0837315, -0.180232, 0.0326604, 0.131094, 0.0901353, -0.00573682, -0.0151899, -0.0740999, 0.00922925, 0.0673747, -0.159551, -0.01417, 0.0882565, -0.0874703, -0.0650582, -0.0480134, 0.19574, 0.126893, -0.107249, -0.177972, 0.0711248, -0.147108, -0.0848871, 0.0496873, -0.201117, -0.186022, -0.344314, -0.0424845, 0.334056, 0.0558526, -0.220083, 0.00147001, -0.079201, 0.000240899, 0.090872, 0.109572, -0.024697, 0.0702074, -0.102598, 0.0625848, 0.213145, -0.0934325, -0.0641467, 0.216044, 0.0309816, 0.0685029, 0.036331, 0.00190075, -0.00793565, 0.0518055, -0.141416, 0.0508154, 0.056066, -0.0227241, 0.0174942, 0.0925652, -0.188056, 0.134942, 0.00672168, 0.0388115, 0.038765, -0.0102831, -0.193823, -0.0985654, 0.139888, -0.201015, 0.129101, 0.217166, 0.0802248, 0.0830562, 0.141532, 0.0278758, 8.72836e-06, 0.0213799, -0.192896, 0.0207353, 0.111057, -0.0098425, 0.0509902, 0.0034256},
 {-0.0741418, 0.0791224, 0.0740489, 0.0178405, -0.0752271, -0.0114142, 0.0147992, -0.147239, 0.133477, -0.0387406, 0.235312, -0.0370632, -0.192054, -0.167837, 0.0204839, 0.165574, -0.164519, -0.15228, -0.09185, 0.0222474, 0.0493721, -0.0739616, 0.150537, 0.0153057, -0.108782, -0.376759, -0.142987, -0.132778, 0.0731146, -0.0624327, -0.0567171, 0.0417157, -0.171107, -0.0464573, -0.00360849, 0.0693255, -0.0291116, -0.0689693, 0.236886, -0.00248763, -0.242616, -0.0197954, -0.0146659, 0.185207, 0.227818, 0.0240656, 0.0669767, -0.0474951, 0.0732038, -0.172222, 0.0834158, 0.127552, 0.150166, 0.0050067, -0.0303582, -0.0915942, -0.0061955, 0.0822166, -0.143945, 0.00802993, 0.0726668, -0.147219, -0.0813509, 0.00798004, 0.161504, 0.131844, -0.0653654, -0.203974, 0.133578, -0.14768, -0.0326288, 0.0757403, -0.207646, -0.13536, -0.324897, -0.0199287, 0.473343, 0.0235187, -0.160997, -0.019061, -0.128479, 0.01569, 0.0320582, 0.13718, -0.0701632, 0.0166919, -0.164733, 0.0207097, 0.17018, -0.145939, -0.0568961, 0.184223, -0.00553707, 0.115999, -0.00470358, -0.0223718, 0.0268668, 0.0479731, -0.0712002, -0.0184448, 0.0345733, -0.00900334, 0.00551786, 0.0669474, -0.143414, 0.0534026, 0.0129054, 0.0303076, 0.0565679, -0.0403045, -0.126619, -0.126732, 0.146101, -0.209943, 0.117068, 0.246301, 0.00654363, 0.0632229, 0.108948, 0.110958, 0.0138581, 0.00817229, -0.197267, 0.0505428, 0.0914466, 0.0142066, 0.0101859, 0.0159471},
 {-0.0506337, 0.0182193, 0.0110646, -0.0452993, -0.0466727, 0.000355807, -0.0384195, -0.171479, 0.102824, -0.0606375, 0.259942, -0.0872932, -0.209607, -0.142605, 0.00019541, 0.153501, -0.144962, -0.0818486, -0.0490099, 0.00406918, 0.0369169, -0.038073, 0.0849571, 0.126583, -0.127964, -0.317237, -0.131608, -0.118658, 0.0251461, -0.0994083, -0.0427236, 0.089688, -0.101114, -0.0164903, 0.0156337, 0.0682156, -0.016543, -0.0737312, 0.191811, -0.0110863, -0.176301, -0.02407, -0.028001, 0.226518, 0.175721, 0.0553716, 0.0499403, -0.085751, 0.118366, -0.16696, 0.0620224, 0.106225, 0.087934, 0.0194375, -0.00761475, -0.152778, 0.000774691, 0.0795807, -0.132125, 0.0169124, 0.0237312, -0.110985, -0.0220941, -0.0819724, 0.183311, 0.110921, -0.129443, -0.155414, 0.131917, -0.120448, -0.0565624, 0.0423732, -0.189654, -0.146513, -0.316214, -0.00580499, 0.355408, 0.0613392, -0.221853, -0.0236515, -0.0819374, 0.0273423, 0.0445918, 0.117853, -0.0322622, -0.0354672, -0.12111, -0.0391914, 0.142866, -0.109375, -0.0230447, 0.199058, -0.0382341, 0.0750576, 0.0317835, 0.0559159, -0.0895886, 0.0753566, -0.0377265, 0.0266127, 0.062714, -0.0399351, 0.0489263, 0.107276, -0.1593, 0.189687, -0.00384177, 0.0358434, 0.0820551, 0.014413, -0.135657, -0.0945056, 0.16793, -0.24496, 0.136804, 0.182464, 0.071957, 0.113234, 0.0679663, 0.166414, -0.056505, 0.0386044, -0.189949, -0.00757538, 0.085717, -0.0172627, -0.0110463, 0.013099}
};

/*std::vector<double> test00 = {-0.090799, 0.0809553, 0.0759825, -0.0463626, -0.111534, -0.0545845, -0.0859236, -0.206957, 0.137534, -0.102071, 0.251071, -0.108932, -0.180827, -0.0782948, -0.0841926, 0.228998, -0.218102, -0.134776, -0.060099, 0.0174231, 0.0375845, -0.00156465, 0.0259291, 0.00259578, -0.0714218, -0.361112, -0.0811657, -0.0958543, 0.0238057, -0.030626, -0.0661701, 0.0917842, -0.206404, -0.0817531, 0.0562123, 0.0634374, -0.0189609, -0.0629081, 0.123064, -0.101644, -0.254773, 0.0129178, 0.0808249, 0.193162, 0.205865, 0.00972574, 0.0207571, -0.144906, 0.0755426, -0.147118, -0.0300265, 0.101131, 0.0524244, 0.0166091, 0.00339021, -0.166959, 0.00409083, 0.145328, -0.113452, -0.00029328, 0.123199, -0.126382, -0.0562261, -0.074728, 0.215938, 0.0421233, -0.10298, -0.170908, 0.145482, -0.0789228, 0.0169046, 0.0310389, -0.177285, -0.197749, -0.280558, -0.0403481, 0.383077, 0.0305359, -0.175888, 0.0779589, -0.0423169, 0.0553363, 0.095131, 0.130145, 0.0314053, 0.0128694, -0.0979745, 0.00303288, 0.176901, -0.115896, 0.0479244, 0.202174, -0.077142, -0.00887056, -0.00225188, 0.0118, -0.0701373, 0.0552305, -0.131145, -0.00932551, 0.0233421, -0.0201789, 0.00118736, 0.111896, -0.124617, 0.04992, -0.00945022, 0.0786036, 0.0560023, -0.0662577, -0.00143249, -0.11028, 0.143417, -0.19958, 0.177899, 0.182281, 0.0361073, 0.13681, 0.064873, 0.0923111, -0.00864414, 0.0141113, -0.238541, 0.0172291, 0.0908509, -0.0467091, 0.0198474, -0.00433859};
std::vector<double> test01 = {-0.0905051, 0.00163369, 0.0535583, -0.0640821, -0.0805288, -0.0890661, -0.0340162, -0.192739, 0.164495, -0.113413, 0.233835, -0.0779192, -0.189857, -0.0858655, -0.0487517, 0.147014, -0.215897, -0.103606, -0.0712985, 0.00700117, 0.0668264, -0.0235734, 0.0690326, 0.026202, -0.115898, -0.384459, -0.112881, -0.0905679, -0.0153887, 0.0114962, -0.0201105, 0.0714012, -0.183783, -0.0746448, 0.024892, 0.0457105, -0.0202484, -0.0655856, 0.200638, -0.0854433, -0.312505, -0.00825135, 0.0735555, 0.170051, 0.175302, -0.00497253, 0.00517798, -0.129615, 0.167219, -0.142599, 0.00237514, 0.138755, 0.0646658, 0.00675762, 0.00139385, -0.0837034, 0.00909007, 0.170721, -0.144759, -0.0197719, 0.133594, -0.136821, -0.0325649, -0.0840999, 0.140316, 0.0897723, -0.101888, -0.181625, 0.128187, -0.146947, -0.003121, 0.0648141, -0.162793, -0.21874, -0.270899, -0.0528614, 0.349046, 0.0430693, -0.147338, 0.0151391, -0.0933118, 0.038197, 0.138434, 0.118174, 0.0280101, 0.0494065, -0.101154, -0.0237216, 0.215073, -0.0925647, 0.0155855, 0.242506, -0.0163804, 0.0374359, 0.0312551, 0.0249686, -0.0933276, 0.0633129, -0.158089, 0.0590632, 0.0240139, -0.0138454, 0.0238764, 0.0534265, -0.127014, 0.103142, 0.00471741, 0.0667835, 0.0666634, -0.0687426, -0.047581, -0.138089, 0.12435, -0.185108, 0.148363, 0.140487, 0.0554305, 0.150784, 0.0657144, 0.0799364, -0.0527384, -0.012457, -0.229388, 0.026468, 0.105851, -0.0175102, 0.0516422, -0.0365241};
distance = Vector128Distance(test00, test01);*/

clock_gettime(CLOCK_REALTIME, &t1);
count = 0;
for (int i = 0; i < vectorXYZ.size(); i++)
{
    for (int j = i; j < vectorXYZ.size(); j++)
    {
        distance = Vector128Distance(vectorXYZ[i], vectorXYZ[j]);
        count++;

        if (distance <= 0.38)
            numpair.push_back(sample_pair(i,j));
    }
}

clusterNum = chinese_whispers(numpair, numlabel);

groupMap.clear();
for (size_t cluster_id = 0; cluster_id < clusterNum; cluster_id++)
{
    std::vector<int> temp;
    for (size_t k = 0; k < numlabel.size(); k++)
    {
        if ( numlabel[k] == cluster_id )
            groupMap[cluster_id].push_back(k);
    }
}

clock_gettime(CLOCK_REALTIME, &t2);
elapsed = ((t2.tv_sec - t1.tv_sec) * 1000000000 + t2.tv_nsec - t1.tv_nsec) / 1000000000.0;
printf("elapsed time=%f\n", elapsed);

// Display the grouped categories
for (auto& group : groupMap)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vectorXYZ[idx_numspos].size(); i++)
            std::cout << vectorXYZ[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

std::cout << std::endl;
std::cout << "counts:" << count << std::endl;

///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// clock_gettime(CLOCK_REALTIME, &t1);

std::sort(vectorXYZ.begin(), vectorXYZ.end(), compareOriginDistance);

std::cout << std::endl;
std::cout << "Comparing:" << std::endl;
count       = 0;
groupIndex  = 0;
groupMap.clear();
for (idx_current = 0; idx_current < vectorXYZ.size(); idx_current++)
{
    bFound = false;
    for (auto& group : groupMap)
    {
        for (auto& idx_numspos : group.second)
        {
            distance = Vector128Distance(vectorXYZ[idx_current], vectorXYZ[idx_numspos]);
            count++;

            if (distance <= 0.38)
            {
                groupMap[group.first].push_back(idx_current);
                bFound = true;
                break;
            }
        }

        if (bFound)
            break;
    }

    // If no group found, create a new group for the current vector
    if (!bFound) {
        groupMap[groupIndex].push_back(idx_current);
        groupIndex++;
    }
}

clock_gettime(CLOCK_REALTIME, &t2);
elapsed = ((t2.tv_sec - t1.tv_sec) * 1000000000 + t2.tv_nsec - t1.tv_nsec) / 1000000000.0;
printf("elapsed time=%f\n", elapsed);

// Display the grouped categories
for (auto& group : groupMap)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vectorXYZ[idx_numspos].size(); i++)
            std::cout << vectorXYZ[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}
std::cout << std::endl;
std::cout << "counts:" << count << std::endl;

}

Anything else?

No response

fatalfeel commented 1 year ago

//my fixed way test pass:

bool compareOriginDistance_Ascending(std::vector v0, std::vector v1) { double summary; double distance0; double distance1;

summary = 0;
for(auto& vit : v0)
    summary += vit*vit;
distance0 = std::sqrt(summary);

summary = 0;
for(auto& vit : v1)
    summary += vit*vit;
distance1 = std::sqrt(summary);

return distance0 < distance1;

}

bool compareOriginDistance_Descending(std::vector v0, std::vector v1) { double summary; double distance0; double distance1;

summary = 0;
for(auto& vit : v0)
    summary += vit*vit;
distance0 = std::sqrt(summary);

summary = 0;
for(auto& vit : v1)
    summary += vit*vit;
distance1 = std::sqrt(summary);

return distance0 > distance1;

}

double Vector3Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<3; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

unordered_map<int, std::vector> VectorGroup(std::vector<std::vector> vectors) { bool bFound; int idx_current; int groupIndex; double distance; unordered_map<int, std::vector> groupMap;

groupIndex  = 0;
groupMap.clear();
for (idx_current = 0; idx_current < vectors.size(); idx_current++)
{
    bFound = false;
    for (auto& group : groupMap)
    {
        for (auto& idx_numspos : group.second)
        {
            distance = Vector128Distance(vectors[idx_current], vectors[idx_numspos]);

            if (distance <= 0.38)
            {
                groupMap[group.first].push_back(idx_current);
                bFound = true;
                break;
            }
        }

        if (bFound)
            break;
    }

    // If no group found, create a new group for the current vector
    if (!bFound) {
        groupMap[groupIndex].push_back(idx_current);
        groupIndex++;
    }
}

return groupMap;

}

std::vector<std::vector> VectorReorder(std::vector<std::vector> vectors, unordered_map<int, std::vector> groupMap) { std::vector<std::vector> vecReorder;

for (auto& group : groupMap)
{
    if( group.second.size() > 1 )
    {
        for (auto& idx_numspos : group.second)
        {
            vecReorder.insert(vecReorder.begin(), vectors[idx_numspos]);
        }
    }
    else
    {
        for (auto& idx_numspos : group.second)
        {
            vecReorder.push_back(vectors[idx_numspos]);
        }
    }
}

return vecReorder;

}

// ---------------------------------------------------------------------------------------- int main(int argc, char** argv) { int count; bool bFound; int idx_current; int groupIndex; double distance; unsigned long clusterNum; std::unordered_map<int, std::vector> groupMap; std::vector<std::vector> vecReorder;

/*std::vector<std::vector<double>> vectorXYZ =
{
   {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
   {-0.122809, 0.141884, 0.0834277, -0.024698, 0.0177337, -0.0565662, -0.0488287, -0.167187, 0.129479, -0.16477, 0.235103, 0.0143175, -0.190848, -0.17434, 0.0239052, 0.109071, -0.1412, -0.152348, -0.130039, 0.00932468, 0.0635409, -0.0535787, 0.0321519, -0.0552175, -0.125623, -0.415993, -0.142093, -0.0782209, -0.0423333, -0.0628295, -0.00478314, -0.0147723, -0.208385, -0.097194, -0.0340456, 0.0250795, 0.0476099, 0.0445404, 0.155967, -0.0330071, -0.211093, 0.0635749, 0.0551622, 0.248809, 0.217021, -0.00950041, 0.0644111, -0.0741558, 0.130536, -0.150162, 0.0454363, 0.0712427, 0.181238, 0.0244739, 0.1227, -0.0829122, 0.0271064, 0.107598, -0.178865, 0.0838384, 0.130686, -0.0890263, -0.0846723, 0.0443754, 0.116611, 0.0607178, -0.0848899, -0.158509, 0.175877, -0.091944, 0.0752838, 0.064769, -0.13667, -0.209451, -0.278074, 0.0388157, 0.396069, 0.0985305, -0.187861, 0.00272873, -0.115045, 0.00759091, 0.0929476, -0.0135563, -0.053188, 0.0110131, -0.108069, 0.113875, 0.196847, 0.0363506, -0.0278321, 0.190228, -0.016135, -0.0186574, 0.0398624, 0.0430936, -0.0728235, 0.0186825, -0.169696, 0.0589708, 0.0177984, -0.132982, -0.0278657, 0.0477713, -0.150841, 0.1162, 0.0068371, 0.0412291, -0.0295409, 0.021594, -0.11953, -0.0136774, 0.109455, -0.217901, 0.175909, 0.194058, -0.0119731, 0.0930409, 0.0532424, 0.0303565, -0.0040981, -0.0295382, -0.186952, -0.0768026, 0.0278174, -0.0122376, 0.0969743, 0.00307787},
   {-0.130142, 0.107555, 0.0572895, -0.0845698, -0.12549, -0.034339, -0.0467723, -0.164135, 0.145387, -0.146743, 0.174315, -0.0318005, -0.172607, -0.101449, -0.0940405, 0.177059, -0.135336, -0.148106, -0.056861, -0.0382697, 0.102158, 0.0209301, 0.0115177, 0.0100246, -0.13297, -0.326479, -0.133685, -0.081091, 0.0400336, -0.0240793, -0.0405149, -0.00885114, -0.233745, -0.0830078, 0.0250101, 0.043742, -0.0131077, -0.0413116, 0.166192, 0.0131113, -0.23724, 0.0351128, 0.0428485, 0.222982, 0.194576, 0.0199175, 0.0339355, -0.113281, 0.15135, -0.11284, 0.0723526, 0.113935, 0.122559, 0.0563529, 0.0387194, -0.0898886, 0.0267035, 0.191483, -0.1494, 0.0588322, 0.123158, -0.0707478, -0.00723561, -0.0496402, 0.168517, 0.0651333, -0.083626, -0.184424, 0.201588, -0.146728, -0.0284528, 0.0278722, -0.145421, -0.157506, -0.274791, 0.0225294, 0.380545, 0.194099, -0.185368, -0.0184206, -0.0614196, 0.038362, 0.138265, 0.085994, -0.0319764, 0.0302294, -0.0496441, -0.00648053, 0.249367, -0.00993198, -0.0543855, 0.253636, 0.00113154, 0.0443343, 0.012549, -0.0368349, -0.101751, 0.00487958, -0.127768, -0.00746846, -0.0324014, -0.0477133, 0.00651821, 0.147431, -0.126395, 0.144034, -0.0331465, 0.062365, -0.0841882, 0.0184607, -0.115114, -0.0362254, 0.121352, -0.120006, 0.229884, 0.172513, 0.0578926, 0.0942701, 0.154926, 0.0281702, 0.0246513, -0.039883, -0.181112, -0.0562719, 0.131885, -0.0961102, 0.153769, 0.0120704},
   {-0.127858, 0.00730303, 0.00490271, -0.107261, -0.0890459, -0.0941798, -0.00644781, -0.21063, 0.1624, -0.148379, 0.236062, -0.112629, -0.174543, -0.108475, -0.0577822, 0.196871, -0.279764, -0.159019, -0.0259959, -0.0225946, 0.0128491, -0.00963796, 0.0674975, 0.0790626, -0.153605, -0.419052, -0.112466, -0.0768207, -0.000853801, -0.00158204, 0.0379006, 0.177633, -0.224044, -0.0595616, -0.00961656, 0.0900579, 0.0370869, -0.0527091, 0.207512, -0.00724315, -0.270678, 0.047113, 0.0788909, 0.263494, 0.133682, 0.011274, 0.0134011, -0.050655, 0.0874453, -0.142138, -0.00569062, 0.0728319, 0.0604688, -0.0604389, -0.022393, -0.109376, 0.0239777, 0.129457, -0.205887, -0.00965135, 0.096523, -0.124476, 0.0079135, -0.0407708, 0.194015, 0.0873009, -0.080362, -0.117395, 0.170097, -0.121238, -0.036494, 0.00980805, -0.130165, -0.158267, -0.338711, -0.0192549, 0.384294, 0.026719, -0.110668, 0.058778, -0.00929742, -0.0161355, 0.0912385, 0.11896, -0.0695814, 0.0216341, -0.107535, 0.0196625, 0.202385, 0.0362525, -0.0565165, 0.212705, -0.0300995, -0.00490006, 0.060506, 0.0280855, -0.0950138, 0.0540323, -0.135612, 0.0492903, 0.0463888, -0.0672418, -0.0231786, 0.124676, -0.185619, 0.130382, -0.0234665, -0.0223005, 0.0139654, 0.0438819, -0.065526, -0.0671872, 0.107503, -0.217735, 0.136946, 0.198381, 0.0595057, 0.179289, 0.0797474, 0.0293032, -0.0526457, 0.0394151, -0.231285, -0.0642926, 0.129709, -0.0697159, 0.156028, 0.0535734},
   {-0.0905051, 0.00163369, 0.0535583, -0.0640821, -0.0805288, -0.0890661, -0.0340162, -0.192739, 0.164495, -0.113413, 0.233835, -0.0779192, -0.189857, -0.0858655, -0.0487517, 0.147014, -0.215897, -0.103606, -0.0712985, 0.00700117, 0.0668264, -0.0235734, 0.0690326, 0.026202, -0.115898, -0.384459, -0.112881, -0.0905679, -0.0153887, 0.0114962, -0.0201105, 0.0714012, -0.183783, -0.0746448, 0.024892, 0.0457105, -0.0202484, -0.0655856, 0.200638, -0.0854433, -0.312505, -0.00825135, 0.0735555, 0.170051, 0.175302, -0.00497253, 0.00517798, -0.129615, 0.167219, -0.142599, 0.00237514, 0.138755, 0.0646658, 0.00675762, 0.00139385, -0.0837034, 0.00909007, 0.170721, -0.144759, -0.0197719, 0.133594, -0.136821, -0.0325649, -0.0840999, 0.140316, 0.0897723, -0.101888, -0.181625, 0.128187, -0.146947, -0.003121, 0.0648141, -0.162793, -0.21874, -0.270899, -0.0528614, 0.349046, 0.0430693, -0.147338, 0.0151391, -0.0933118, 0.038197, 0.138434, 0.118174, 0.0280101, 0.0494065, -0.101154, -0.0237216, 0.215073, -0.0925647, 0.0155855, 0.242506, -0.0163804, 0.0374359, 0.0312551, 0.0249686, -0.0933276, 0.0633129, -0.158089, 0.0590632, 0.0240139, -0.0138454, 0.0238764, 0.0534265, -0.127014, 0.103142, 0.00471741, 0.0667835, 0.0666634, -0.0687426, -0.047581, -0.138089, 0.12435, -0.185108, 0.148363, 0.140487, 0.0554305, 0.150784, 0.0657144, 0.0799364, -0.0527384, -0.012457, -0.229388, 0.026468, 0.105851, -0.0175102, 0.0516422, -0.0365241},
   {-0.137728, 0.132228, 0.0459142, 0.00797745, -0.120738, -0.022173, -0.0488161, -0.161654, 0.0541456, 0.0183052, 0.269579, -0.107488, -0.324014, 0.0163161, -0.12478, 0.0983449, -0.14433, -0.100667, -0.0710296, -0.059846, 0.00477455, -0.0325038, 0.0111534, 0.0370959, -0.0106259, -0.333755, -0.0589816, -0.103582, 0.111262, -0.110681, -0.00864846, 0.00292839, -0.11085, -0.102033, 0.0289328, 0.115192, -0.0372389, -0.0642154, 0.282596, -0.0711618, -0.103423, -0.013593, 0.0666339, 0.295447, 0.137473, 0.0907247, 0.0229842, -0.0488636, 0.0786334, -0.277129, 0.0850812, 0.169264, 0.158768, 0.0390769, 0.0779419, -0.158195, -0.0221697, 0.0890846, -0.122131, 0.0262215, 0.0937135, 0.0022936, -0.0358059, -0.102401, 0.179279, 0.0815198, -0.0529744, -0.0701297, 0.203933, -0.150615, -0.105924, -0.0132928, -0.0896192, -0.124213, -0.239991, 0.0507977, 0.387855, 0.137262, -0.170002, 0.00837796, -0.0165664, -0.0545538, 0.0435606, -0.0448073, -0.0888326, -0.0351871, -0.127447, -0.00881629, 0.158357, -0.0552326, 0.00831018, 0.137581, 0.0269404, 0.0386932, 0.0934804, 0.0723945, -0.0757106, 0.0100709, -0.171715, 0.00957492, 0.113146, -0.0545902, 0.0441366, 0.098829, -0.188906, 0.082529, -0.0242792, -0.0354512, 0.0372229, 0.01404, -0.094255, -0.0364086, 0.248493, -0.215333, 0.17409, 0.201649, -0.0291437, 0.077616, 0.0844647, 0.0370994, 0.0564283, 0.0103035, -0.18739, -0.177614, 0.00648249, -0.0226764, -0.0624888, 0.0667067},
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};*/

std::vector<std::vector<double>> vectorXYZ =
{
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   {-0.0748446, 0.0831037, 0.0903786, 0.00468496, -0.0615719, -0.00725037, 0.0213802, -0.140868, 0.133049, -0.0354381, 0.237554, -0.0384337, -0.192703, -0.17029, 0.0201585, 0.160278, -0.163832, -0.147459, -0.0887659, 0.0208597, 0.0449609, -0.0634466, 0.152064, 0.0048834, -0.0977421, -0.383, -0.137222, -0.142624, 0.0665531, -0.0512118, -0.0545371, 0.0465196, -0.167417, -0.0412013, -0.0180851, 0.0777152, -0.023425, -0.0638658, 0.228866, -0.00129169, -0.237122, -0.021439, -0.0194378, 0.18488, 0.222494, 0.0213831, 0.0729571, -0.041125, 0.0745514, -0.170625, 0.0789374, 0.1248, 0.146734, 0.00271353, -0.0219023, -0.0917336, -0.00113783, 0.0668737, -0.132955, 0.0042024, 0.0716838, -0.13863, -0.0785373, 0.00645374, 0.156922, 0.115945, -0.0621919, -0.197308, 0.125289, -0.141314, -0.0360338, 0.0799477, -0.212649, -0.128646, -0.323772, -0.0121884, 0.465692, 0.0230818, -0.160768, -0.0132815, -0.13759, 0.0187419, 0.0418858, 0.134863, -0.0628828, 0.030229, -0.176878, 0.0115555, 0.164159, -0.152561, -0.0578321, 0.181625, -0.00738001, 0.125644, -0.0114808, -0.0229952, 0.0311997, 0.0574098, -0.0747416, -0.0121113, 0.0404074, -0.00833964, -0.00827741, 0.058827, -0.149412, 0.0492322, 0.0143517, 0.0337621, 0.0571263, -0.0439672, -0.121749, -0.123964, 0.15079, -0.208171, 0.101507, 0.253647, -0.00471768, 0.0670137, 0.116418, 0.110069, 0.00777472, 0.00542299, -0.203534, 0.0463707, 0.0916238, 0.0262819, -0.00273884, 0.0208344},
   {-0.0548898, 0.0159696, 0.00883517, -0.0509646, -0.0470866, 0.0108709, -0.040936, -0.167358, 0.101617, -0.0566354, 0.26616, -0.0742025, -0.215996, -0.145487, -0.000317637, 0.150213, -0.142836, -0.0799972, -0.0439346, 0.00212246, 0.0386918, -0.0352472, 0.0724579, 0.123686, -0.138597, -0.318605, -0.137532, -0.119053, 0.0195908, -0.0899341, -0.0385526, 0.0834017, -0.0992613, -0.0143362, 0.0194184, 0.060457, -0.010044, -0.0697713, 0.191279, -0.0098703, -0.171093, -0.0174853, -0.0246302, 0.230028, 0.173648, 0.0541548, 0.0574277, -0.0864765, 0.116783, -0.165452, 0.0704575, 0.104073, 0.0948657, 0.0208948, -0.014448, -0.155008, -0.00570159, 0.0900586, -0.142519, 0.0245037, 0.0177129, -0.112736, -0.0294518, -0.0814567, 0.185098, 0.115347, -0.139726, -0.165029, 0.131474, -0.120816, -0.0559547, 0.0417816, -0.194113, -0.152617, -0.321154, 0.00774562, 0.357086, 0.0698594, -0.231315, -0.0210713, -0.0869006, 0.0297075, 0.0497423, 0.115765, -0.0251565, -0.0405468, -0.115744, -0.0372483, 0.147465, -0.104774, -0.0275968, 0.207481, -0.034289, 0.0772082, 0.0299481, 0.0638179, -0.0878023, 0.0709576, -0.0325687, 0.0281277, 0.0626253, -0.0318067, 0.0577374, 0.107419, -0.160097, 0.199062, -0.00215383, 0.0390826, 0.0822439, 0.0102252, -0.135107, -0.0926745, 0.171824, -0.253149, 0.141364, 0.177489, 0.0760113, 0.119651, 0.0726413, 0.158484, -0.053785, 0.0319722, -0.193387, -0.00480802, 0.0887374, -0.0249571, 0.00152551, 0.0133287},
};

///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// std::sort(vectorXYZ.begin(), vectorXYZ.end(), compareOriginDistance_Ascending);

/*std::cout << std::endl;
std::cout << "Sorting:" << std::endl;
count = 0;
for (auto& oneindex : vectorXYZ)
{
    std::cout << "{";
    for(auto& vit : oneindex)
        std::cout << vit << ", ";

    std::cout << "}" << std::endl;
}*/
//cout << "hit enter to continue" << endl;
//cin.get();

groupMap.clear();
groupMap = VectorGroup(vectorXYZ);
for (auto& group : groupMap)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vectorXYZ[idx_numspos].size(); i++)
            std::cout << vectorXYZ[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

/////// std::cout << std::endl; std::cout << "Re-sequence:" << std::endl; vecReorder = VectorReorder(vectorXYZ, groupMap);

////// std::cout << std::endl; std::cout << "Comparing2:" << std::endl; groupMap.clear(); groupMap = VectorGroup(vecReorder);

// Display the grouped categories
for (auto& group : groupMap)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vecReorder[idx_numspos].size(); i++)
            std::cout << vecReorder[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

}

fatalfeel commented 1 year ago

//improve it

include "dlib/clustering.h"

include "dlib/string.h"

using namespace dlib; using namespace std;

typedef struct _VECTOR_GROUP_T { std::vector<std::vector> vectorReorder; std::unordered_map<int, std::vector> vectorMap; }VECTOR_GROUP_T;

bool compareOriginDistance_Ascending(std::vector v0, std::vector v1) { double summary; double distance0; double distance1;

summary = 0;
for(auto& vit : v0)
    summary += vit*vit;
distance0 = std::sqrt(summary);

summary = 0;
for(auto& vit : v1)
    summary += vit*vit;
distance1 = std::sqrt(summary);

return distance0 < distance1;

}

double Vector3Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<3; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

unordered_map<int, std::vector> getVectorMap(std::vector<std::vector> vectors) { bool bFound; int idx_current; int groupIndex; double distance; unordered_map<int, std::vector> vectorMap;

groupIndex  = 0;
vectorMap.clear();
for (idx_current = 0; idx_current < vectors.size(); idx_current++)
{
    bFound = false;
    for (auto& group : vectorMap)
    {
        for (auto& idx_numspos : group.second)
        {
            distance = Vector128Distance(vectors[idx_current], vectors[idx_numspos]);

            if (distance <= 0.38)
            {
                vectorMap[group.first].push_back(idx_current);
                bFound = true;
                break;
            }
        }

        if (bFound)
            break;
    }

    // If no group found, create a new group for the current vector
    if (!bFound) {
        vectorMap[groupIndex].push_back(idx_current);
        groupIndex++;
    }
}

return vectorMap;

}

VECTOR_GROUP_T getVectorReorder(std::vector<std::vector> vectors, unordered_map<int, std::vector> vectorMap) { size_t count; std::vector<std::vector> vectorReorder; unordered_map<int, std::vector> vectorGroup; VECTOR_GROUP_T vgret;

count = 0;
for (auto& group : vectorMap)
{
    if( group.second.size() > 1 )
    {
        for (auto& idx_numspos : group.second)
        {
            count++;
            vectorReorder.insert(vectorReorder.begin(), vectors[idx_numspos]);
        }
    }
    else
    {
        for (auto& idx_numspos : group.second)
        {
            vectorReorder.insert(vectorReorder.end(), vectors[idx_numspos]);
        }
    }
}

std::sort(vectorReorder.begin()+count, vectorReorder.end(), compareOriginDistance_Ascending);
/*for (auto& oneindex : vectorReorder)
{
    std::cout << "{";
    for(auto& vit : oneindex)
        std::cout << vit << ", ";

    std::cout << "}" << std::endl;
}
std::cout << std::endl;*/

vectorGroup = getVectorMap(vectorReorder);

// Display the grouped categories
/*for (auto& group : vectorGroup)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vectorReorder[idx_numspos].size(); i++)
            std::cout << vectorReorder[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}*/

if( vectorGroup.size() <  vectorMap.size() )
{
    vgret = getVectorReorder(vectorReorder, vectorGroup);
}
else
{
    vgret.vectorReorder = vectors;
    vgret.vectorMap     = vectorMap;
}

return vgret;

}

// ---------------------------------------------------------------------------------------- int main(int argc, char** argv) { int count; bool bFound; int idx_current; int groupIndex; double distance; unsigned long clusterNum; std::unordered_map<int, std::vector> vectorMap; std::vector numlabel; std::vector numpair; double elapsed; struct timespec t1, t2; std::vector<std::vector> vectorReorder; VECTOR_GROUP_T vgreorder;

/*std::vector<std::vector<double>> vectorXYZ =
{
    {13.1, 13.1, 13.1}, {8.3, 8.3, 8.3}, {1.1, 1.1, 1.1},    {2.2, 2.2, 2.2},  {7, -7, 7},            {-8.2, -8.2, -8.2}, {12, 12, 12}, {7.7, 7.7, 7.7}, {13.2, 13.2, 13.2}, {13.3, 13.3, 13.3},
    {8.1, 8.1, 8.1},    {1.6, 1.6, 1.6}, {2.35, 2.35, 2.35}, {7.5, -7.5, 7.5}, {-8.15, -8.15, -8.15}, {12, 12, 12},       {7.6, 7.6, 7.6}, {13, 13, 13}, {13.2, 13.2, 13.2}, {13.6, 13.6, 13.6}
};*/

/*std::vector<std::vector<double>> vectorXYZ =
{
   {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
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};*/

std::vector<std::vector<double>> vectorXYZ =
{
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};

/*std::vector<std::vector<double>> vectorXYZ =
{
    {-0.0922139, 0.014835, 0.0615186, -0.0613445, -0.0842193, -0.0863361, -0.0348351, -0.192606, 0.165802, -0.11187, 0.24151, -0.0714444, -0.193089, -0.0852909, -0.0517145, 0.152266, -0.21264, -0.105057, -0.0635965, 0.00901539, 0.0630926, -0.0164421, 0.06861, 0.0178102, -0.112936, -0.388663, -0.108115, -0.0938505, -0.0193902, 0.0128208, -0.0207759, 0.0756832, -0.179806, -0.0733699, 0.029109, 0.045768, -0.0273521, -0.0574803, 0.200632, -0.0890294, -0.308203, -0.0140844, 0.0756456, 0.174128, 0.17338, -0.00579188, 0.00961889, -0.132004, 0.16143, -0.135313, -0.00646421, 0.138765, 0.0655942, 0.00611258, 0.00356891, -0.0842521, 0.00714394, 0.162991, -0.150792, -0.0226385, 0.136088, -0.137649, -0.0368548, -0.0861677, 0.143609, 0.0807912, -0.104157, -0.181241, 0.128984, -0.147141, -0.00445991, 0.0627249, -0.164103, -0.220942, -0.272696, -0.0563433, 0.345661, 0.0434627, -0.139655, 0.0182113, -0.086185, 0.0332114, 0.131596, 0.11634, 0.025296, 0.0504582, -0.100727, -0.0220715, 0.209314, -0.0958017, 0.0189105, 0.236872, -0.0226718, 0.0390203, 0.0252837, 0.0269215, -0.094761, 0.0679159, -0.158159, 0.0604561, 0.0155292, -0.0184976, 0.0283268, 0.0561514, -0.124956, 0.0972098, 0.00117806, 0.0713599, 0.0619397, -0.0655348, -0.0511712, -0.141696, 0.124977, -0.183522, 0.14881, 0.140886, 0.0487101, 0.148743, 0.0691148, 0.0776986, -0.0548896, -0.0134991, -0.23296, 0.0234824, 0.102594, -0.02065, 0.0533602, -0.0355471, },
    {-0.116841, -0.00360254, 0.0842642, -0.0536241, -0.147909, -0.0987527, -0.0447047, -0.172996, 0.131981, -0.154351, 0.214814, -0.11483, -0.172786, -0.107617, -0.0721182, 0.192985, -0.147722, -0.170232, -0.0696199, 0.00806045, 0.0907724, -0.042418, 0.0418889, -0.0311626, -0.102543, -0.369248, -0.0781983, -0.0354331, -0.00957931, -0.0151635, -0.054986, 0.0680995, -0.23803, -0.0687504, 0.0281725, 0.111528, 0.00202391, -0.0730014, 0.150359, -0.0479983, -0.268576, 0.00450286, 0.0584176, 0.1393, 0.181665, 0.0570001, 0.0172357, -0.164545, 0.150154, -0.173847, 0.0104593, 0.118561, 0.0949134, -0.00500327, 0.026633, -0.074316, 0.0249305, 0.124505, -0.133277, -0.0232477, 0.12637, -0.0530731, -0.0664759, -0.119271, 0.215156, 0.084003, -0.109149, -0.106832, 0.197915, -0.0882972, -0.0415055, 0.00280991, -0.148537, -0.177842, -0.265447, -0.0286246, 0.404068, 0.0504441, -0.187449, -0.00418245, -0.0490191, 0.0592538, 0.0967063, 0.11137, -0.00834753, 0.029591, -0.0893535, 0.0101208, 0.220807, -0.102364, 0.0148759, 0.196153, 0.00232718, 0.0571948, -0.00814137, 0.00652489, -0.0596234, 0.0624491, -0.147775, 0.009898, 0.0666355, -0.00163342, 0.0105756, 0.107809, -0.0972407, 0.0674728, -0.0352077, 0.0343986, 0.0308458, -0.0547627, -0.037943, -0.0976082, 0.0431078, -0.161534, 0.168261, 0.160671, 0.0246185, 0.118985, 0.0831275, 0.0874914, 0.0268532, 0.00401441, -0.203458, -0.0455468, 0.0914981, -0.0105782, 0.0512558, 0.0178294},
    {-0.134122, 0.102923, 0.0893012, -0.0404133, -0.157011, -0.0651067, -0.0266344, -0.179529, 0.110977, -0.142653, 0.276643, -0.0846277, -0.243666, -0.0779915, -0.0628087, 0.22334, -0.191288, -0.168995, -0.077518, -0.00793185, 0.0588947, 0.000175028, 0.0376891, 0.00926274, -0.0752256, -0.347711, -0.0443794, -0.0241467, -0.0167246, -0.0408544, -0.0439673, 0.0591294, -0.246412, -0.109356, 0.0694626, 0.1147, -0.0290157, -0.0573398, 0.19052, -0.0810379, -0.257902, 0.00329765, 0.111644, 0.209219, 0.183544, -0.0288243, 0.00473161, -0.181531, 0.127082, -0.239063, -0.00583533, 0.154952, 0.0401366, 0.0435631, -0.0356325, -0.113888, -0.00331303, 0.172375, -0.0767661, -0.017613, 0.157196, -0.110775, -0.0696957, -0.0892006, 0.208207, 0.0320268, -0.140239, -0.156816, 0.0933887, -0.0883665, -0.0393588, 0.0357888, -0.147406, -0.180221, -0.278336, 0.0198301, 0.421467, -0.00476765, -0.180859, 0.0310222, -0.0936258, 0.0335601, 0.0848524, 0.12762, 0.0293214, 0.00450128, -0.107266, 0.0495309, 0.23338, -0.118509, 0.0469492, 0.237295, -0.00114865, 0.0389446, 0.0519999, 0.0942251, -0.0843226, 0.0222033, -0.185129, 0.0152419, 0.0319152, -0.0655043, -0.0178098, 0.0960474, -0.150015, 0.0705612, -0.0262537, 0.0479132, 0.071117, -0.0934057, -0.0418915, -0.132365, 0.0970196, -0.17355, 0.18976, 0.180692, 0.000213142, 0.142628, 0.125427, 0.100379, 0.0134767, 0.00870885, -0.166143, -0.0264429, 0.105878, 0.00147119, 0.0212532, -0.0450881},
    {-0.120999, 0.0571289, 0.0998271, -0.052434, -0.14173, -0.0893151, -0.0765896, -0.176613, 0.103261, -0.117876, 0.257788, -0.130373, -0.200838, -0.0771964, -0.0673978, 0.220967, -0.232715, -0.136761, -0.0855167, 0.00471388, 0.0506463, 0.0259615, 0.0330275, -0.0159807, -0.0906861, -0.373074, -0.0782295, -0.114117, 0.0113052, -0.0264268, -0.0464206, 0.0334541, -0.207841, -0.110833, 0.0689938, 0.0550363, -0.0392009, -0.0742869, 0.141574, -0.0726057, -0.252269, -0.00596735, 0.0738808, 0.179473, 0.194298, 0.0361882, 0.0151976, -0.153536, 0.126189, -0.19106, 0.0057598, 0.0871133, 0.0367361, 0.0552625, 0.0149207, -0.128133, 0.0296922, 0.191249, -0.139456, -0.00491761, 0.14801, -0.116062, -0.0363894, -0.0617599, 0.220187, 0.0455419, -0.105509, -0.151176, 0.122882, -0.100758, -0.0143762, 0.0238365, -0.136616, -0.163048, -0.280892, -0.0316741, 0.381637, 0.00540447, -0.169948, 0.0103986, -0.0334376, 0.0412415, 0.114936, 0.120011, 0.0218304, 0.00705745, -0.0821894, -0.0223583, 0.193955, -0.114422, 0.0628375, 0.234044, -0.0476202, 0.0118247, 0.0549456, 0.0162443, -0.0893718, 0.0278989, -0.104214, 0.0209576, 0.0185992, -0.0357159, -0.0141204, 0.0748953, -0.106736, 0.0723385, -0.0416188, 0.0617989, 0.0259566, -0.115909, 0.000833431, -0.112216, 0.123481, -0.177156, 0.172822, 0.178622, 0.0294017, 0.154123, 0.0604484, 0.0632063, -0.0320832, 0.0262824, -0.229972, 0.00182695, 0.110385, -0.0296462, 0.0197107, -0.0254563},
};*/

/*std::vector<double> test00 = {-0.13449, 0.135767, 0.0543103, 0.00538723, -0.115969, -0.0361467, -0.0519602, -0.156342, 0.0458966, 0.016311, 0.264109, -0.104796, -0.321962, 0.00856461, -0.12671, 0.105556, -0.144141, -0.105265, -0.0807759, -0.0484962, 0.0165312, -0.0262091, 0.0163267, 0.0284821, -0.00441116, -0.328627, -0.0563466, -0.0947483, 0.119196, -0.109876, -0.0297525, 0.00919881, -0.121137, -0.114734, 0.0334566, 0.125127, -0.0390485, -0.0645584, 0.272041, -0.0622663, -0.107865, -0.00584847, 0.0691733, 0.295653, 0.152317, 0.0917598, 0.0268174, -0.0530228, 0.0719688, -0.28086, 0.0826676, 0.166326, 0.161047, 0.0587466, 0.0745787, -0.159634, -0.0220818, 0.0889814, -0.121166, 0.0214681, 0.0855194, 0.00349782, -0.0348935, -0.103057, 0.17085, 0.0761018, -0.0503001, -0.0744528, 0.199122, -0.153348, -0.113036, -0.010562, -0.0864006, -0.113698, -0.235269, 0.0358717, 0.372882, 0.139316, -0.172335, 0.0143715, -0.0217375, -0.0651269, 0.0358975, -0.0464502, -0.0793241, -0.0122178, -0.123952, -0.00489768, 0.164078, -0.0663975, 0.013798, 0.142679, 0.0347793, 0.0397555, 0.0943212, 0.0699233, -0.0691427, 0.00829752, -0.186369, -0.0073045, 0.106215, -0.0554534, 0.0353337, 0.0909476, -0.186064, 0.0833709, -0.0167911, -0.029757, 0.0287787, 0.00165267, -0.0887326, -0.0332299, 0.238682, -0.207301, 0.180722, 0.216773, -0.0269135, 0.0710185, 0.0900128, 0.0280011, 0.0639316, 0.000865693, -0.178035, -0.181219, 0.0147542, -0.0101232, -0.0593768, 0.0677032, };
std::vector<double> test01 = {-0.101429, 0.136431, 0.0454709, -0.0939419, -0.0724709, -0.0621933, -0.0471178, -0.12532, 0.107738, -0.0604801, 0.330023, -0.029556, -0.180469, -0.155341, 0.00177305, 0.135168, -0.210094, -0.0965532, -0.0690687, 0.0242426, 0.0788501, -0.0594601, 0.0396764, -0.0137328, -0.0660228, -0.371847, -0.10975, -0.104467, 0.0785306, -0.0797105, -0.0379765, -0.0591423, -0.180304, -0.123294, 0.0510178, 0.0470444, -0.0436093, -0.0364558, 0.178629, -0.0583961, -0.205513, 0.036915, 0.0880085, 0.22311, 0.206403, 0.116782, 0.0553952, -0.108484, 0.157496, -0.105017, 0.079722, 0.114558, 0.184691, 0.0702143, 0.0119959, -0.112653, 0.0496144, 0.152839, -0.244021, 0.00968685, 0.160467, -0.0587186, -0.037272, -0.034166, 0.219511, 0.107122, -0.129249, -0.20956, 0.14826, -0.141396, -0.0597541, 0.0149238, -0.152748, -0.155213, -0.249023, 0.00113933, 0.297554, 0.0948173, -0.162169, -0.0309031, -0.0709004, -0.0183375, 0.048984, 0.0858797, -0.04277, 0.00750834, -0.0915507, -0.0435502, 0.186794, -0.0560488, 0.0222456, 0.184955, -0.0117741, 0.02312, 0.00461461, 0.0205116, -0.132194, 0.0738715, -0.106056, 0.00952845, -0.0391546, -0.0747313, 0.0084279, 0.090696, -0.177986, 0.168131, -0.0393139, 0.0673088, -0.0342016, -0.0512654, -0.0129092, -0.0722354, 0.0885344, -0.208359, 0.252788, 0.213215, 0.0980301, 0.0993239, 0.0883514, 0.0458915, 0.0329974, -0.000707327, -0.234946, -0.0590889, 0.0166818, -0.0704486, 0.0965144, 0.00290305, };
distance = Vector128Distance(test00, test01);
std::cout << "specific distance = " << distance <<std::endl;*/

/////// std::cout << std::endl; std::cout << "ReSequence:" << std::endl; vectorMap = getVectorMap(vectorXYZ); vgreorder = getVectorReorder(vectorXYZ, vectorMap);

/*for (auto& oneindex : vectorReorder)
{
    std::cout << "{";
    for(auto& vit : oneindex)
        std::cout << vit << ", ";

    std::cout << "}" << std::endl;
}
std::cout << std::endl;*/

// Display the grouped categories
for (auto& group : vgreorder.vectorMap)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vgreorder.vectorReorder[idx_numspos].size(); i++)
            std::cout << vgreorder.vectorReorder[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

}

Compaile commented 1 year ago

First of all, format the code in a proper way. makes it so hard to follow. Also please don't create such bloated examples if you want a discussion provide a clean minimal example

2.) Your custom cluster algorithm is different from the Chinese cluster algorithm, why would you expect the same results? Obviously, you can't compare the speed either. Please read the paper about the Chinese cluster algorithm.

We have been using it without any problems with big data.

fatalfeel commented 1 year ago

include "dlib/clustering.h"

include "dlib/string.h"

using namespace dlib; using namespace std;

static int s_distcount = 0;

bool compareOriginDistance_Ascending(std::vector v0, std::vector v1) { double summary; double distance0; double distance1;

summary = 0;
for(auto& vit : v0)
    summary += vit*vit;
distance0 = std::sqrt(summary);

summary = 0;
for(auto& vit : v1)
    summary += vit*vit;
distance1 = std::sqrt(summary);

return distance0 < distance1;

}

double Vector3Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<3; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

unordered_map<int, std::vector<std::vector>> getVectorMap(std::vector<std::vector> vectorValue) { bool bFound; int idx_current; int groupIndex; double distance; unordered_map<int, std::vector<std::vector>> vector_Map;

groupIndex = 0;
for (idx_current = 0; idx_current < vectorValue.size(); idx_current++)
{
    bFound = false;
    for (auto& group : vector_Map)
    {
        //for (auto& idx_numspos : group.second)
        for (auto& onevector : group.second)
        {
            s_distcount++;
            distance = Vector128Distance(vectorValue[idx_current], onevector);

            if (distance <= 0.38)
            {
                vector_Map[group.first].push_back(vectorValue[idx_current]);
                bFound = true;
                break;
            }
        }

        if (bFound)
            break;
    }

    // If no group found, create a new group for the current vector
    if (!bFound) {
        vector_Map[groupIndex].push_back(vectorValue[idx_current]);
        groupIndex++;
    }
}

return vector_Map;

}

unordered_map<int, std::vector<std::vector>> getVectorReorder(unordered_map<int, std::vector<std::vector>> vector_Map) { size_t multicount; std::vector<std::vector> reorder_128d; //keep multi-vector group unordered_map<int, std::vector<std::vector>> reorder_Map; unordered_map<int, std::vector<std::vector>> vgret;

multicount = 0;
for (auto& group : vector_Map)
{
    if( group.second.size() > 1 )
    {
        for (auto& onevector : group.second)
        {
            reorder_128d.insert(reorder_128d.begin() + multicount, onevector);
            multicount++;
        }
    }
    else
    {
        for (auto& onevector : group.second)
        {
            reorder_128d.insert(reorder_128d.end(), onevector);
        }
    }
}

/*for (auto& oneindex : reorder_128d)
{
    std::cout << "{";

    for(auto& vit : oneindex)
        std::cout << vit << ", ";

    std::cout << "}";
    std::cout << std::endl;
}*/

std::sort(reorder_128d.begin()+multicount, reorder_128d.end(), compareOriginDistance_Ascending);

reorder_Map = getVectorMap(reorder_128d);
if( reorder_Map.size() <  vector_Map.size() )
    vgret = getVectorReorder(reorder_Map);
else
    vgret = vector_Map;

return vgret;

}

// ---------------------------------------------------------------------------------------- int main(int argc, char** argv) { double distance; unsigned long clusterNum; std::vector numlabel; std::vector numpair; double elapsed; struct timespec t1, t2; std::unordered_map<int, std::vector> vector_Pair; unordered_map<int, std::vector<std::vector>> vector_Map; unordered_map<int, std::vector<std::vector>> vgret;

/*std::vector<std::vector<double>> vector_XYZ =
{
    {13.1, 13.1, 13.1}, {8.3, 8.3, 8.3}, {1.1, 1.1, 1.1},    {2.2, 2.2, 2.2},  {7, -7, 7},            {-8.2, -8.2, -8.2}, {12, 12, 12}, {7.7, 7.7, 7.7}, {13.2, 13.2, 13.2}, {13.3, 13.3, 13.3},
    {8.1, 8.1, 8.1},    {1.6, 1.6, 1.6}, {2.35, 2.35, 2.35}, {7.5, -7.5, 7.5}, {-8.15, -8.15, -8.15}, {12, 12, 12},       {7.6, 7.6, 7.6}, {13, 13, 13}, {13.2, 13.2, 13.2}, {13.6, 13.6, 13.6}
};*/

/*std::vector<std::vector<double>> vector_XYZ =
{
   {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
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};*/

std::vector<std::vector<double>> vector_XYZ =
{
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};

/*std::vector<std::vector<double>> vector_XYZ =
{
    {-0.0922139, 0.014835, 0.0615186, -0.0613445, -0.0842193, -0.0863361, -0.0348351, -0.192606, 0.165802, -0.11187, 0.24151, -0.0714444, -0.193089, -0.0852909, -0.0517145, 0.152266, -0.21264, -0.105057, -0.0635965, 0.00901539, 0.0630926, -0.0164421, 0.06861, 0.0178102, -0.112936, -0.388663, -0.108115, -0.0938505, -0.0193902, 0.0128208, -0.0207759, 0.0756832, -0.179806, -0.0733699, 0.029109, 0.045768, -0.0273521, -0.0574803, 0.200632, -0.0890294, -0.308203, -0.0140844, 0.0756456, 0.174128, 0.17338, -0.00579188, 0.00961889, -0.132004, 0.16143, -0.135313, -0.00646421, 0.138765, 0.0655942, 0.00611258, 0.00356891, -0.0842521, 0.00714394, 0.162991, -0.150792, -0.0226385, 0.136088, -0.137649, -0.0368548, -0.0861677, 0.143609, 0.0807912, -0.104157, -0.181241, 0.128984, -0.147141, -0.00445991, 0.0627249, -0.164103, -0.220942, -0.272696, -0.0563433, 0.345661, 0.0434627, -0.139655, 0.0182113, -0.086185, 0.0332114, 0.131596, 0.11634, 0.025296, 0.0504582, -0.100727, -0.0220715, 0.209314, -0.0958017, 0.0189105, 0.236872, -0.0226718, 0.0390203, 0.0252837, 0.0269215, -0.094761, 0.0679159, -0.158159, 0.0604561, 0.0155292, -0.0184976, 0.0283268, 0.0561514, -0.124956, 0.0972098, 0.00117806, 0.0713599, 0.0619397, -0.0655348, -0.0511712, -0.141696, 0.124977, -0.183522, 0.14881, 0.140886, 0.0487101, 0.148743, 0.0691148, 0.0776986, -0.0548896, -0.0134991, -0.23296, 0.0234824, 0.102594, -0.02065, 0.0533602, -0.0355471, },
    {-0.116841, -0.00360254, 0.0842642, -0.0536241, -0.147909, -0.0987527, -0.0447047, -0.172996, 0.131981, -0.154351, 0.214814, -0.11483, -0.172786, -0.107617, -0.0721182, 0.192985, -0.147722, -0.170232, -0.0696199, 0.00806045, 0.0907724, -0.042418, 0.0418889, -0.0311626, -0.102543, -0.369248, -0.0781983, -0.0354331, -0.00957931, -0.0151635, -0.054986, 0.0680995, -0.23803, -0.0687504, 0.0281725, 0.111528, 0.00202391, -0.0730014, 0.150359, -0.0479983, -0.268576, 0.00450286, 0.0584176, 0.1393, 0.181665, 0.0570001, 0.0172357, -0.164545, 0.150154, -0.173847, 0.0104593, 0.118561, 0.0949134, -0.00500327, 0.026633, -0.074316, 0.0249305, 0.124505, -0.133277, -0.0232477, 0.12637, -0.0530731, -0.0664759, -0.119271, 0.215156, 0.084003, -0.109149, -0.106832, 0.197915, -0.0882972, -0.0415055, 0.00280991, -0.148537, -0.177842, -0.265447, -0.0286246, 0.404068, 0.0504441, -0.187449, -0.00418245, -0.0490191, 0.0592538, 0.0967063, 0.11137, -0.00834753, 0.029591, -0.0893535, 0.0101208, 0.220807, -0.102364, 0.0148759, 0.196153, 0.00232718, 0.0571948, -0.00814137, 0.00652489, -0.0596234, 0.0624491, -0.147775, 0.009898, 0.0666355, -0.00163342, 0.0105756, 0.107809, -0.0972407, 0.0674728, -0.0352077, 0.0343986, 0.0308458, -0.0547627, -0.037943, -0.0976082, 0.0431078, -0.161534, 0.168261, 0.160671, 0.0246185, 0.118985, 0.0831275, 0.0874914, 0.0268532, 0.00401441, -0.203458, -0.0455468, 0.0914981, -0.0105782, 0.0512558, 0.0178294},
    {-0.134122, 0.102923, 0.0893012, -0.0404133, -0.157011, -0.0651067, -0.0266344, -0.179529, 0.110977, -0.142653, 0.276643, -0.0846277, -0.243666, -0.0779915, -0.0628087, 0.22334, -0.191288, -0.168995, -0.077518, -0.00793185, 0.0588947, 0.000175028, 0.0376891, 0.00926274, -0.0752256, -0.347711, -0.0443794, -0.0241467, -0.0167246, -0.0408544, -0.0439673, 0.0591294, -0.246412, -0.109356, 0.0694626, 0.1147, -0.0290157, -0.0573398, 0.19052, -0.0810379, -0.257902, 0.00329765, 0.111644, 0.209219, 0.183544, -0.0288243, 0.00473161, -0.181531, 0.127082, -0.239063, -0.00583533, 0.154952, 0.0401366, 0.0435631, -0.0356325, -0.113888, -0.00331303, 0.172375, -0.0767661, -0.017613, 0.157196, -0.110775, -0.0696957, -0.0892006, 0.208207, 0.0320268, -0.140239, -0.156816, 0.0933887, -0.0883665, -0.0393588, 0.0357888, -0.147406, -0.180221, -0.278336, 0.0198301, 0.421467, -0.00476765, -0.180859, 0.0310222, -0.0936258, 0.0335601, 0.0848524, 0.12762, 0.0293214, 0.00450128, -0.107266, 0.0495309, 0.23338, -0.118509, 0.0469492, 0.237295, -0.00114865, 0.0389446, 0.0519999, 0.0942251, -0.0843226, 0.0222033, -0.185129, 0.0152419, 0.0319152, -0.0655043, -0.0178098, 0.0960474, -0.150015, 0.0705612, -0.0262537, 0.0479132, 0.071117, -0.0934057, -0.0418915, -0.132365, 0.0970196, -0.17355, 0.18976, 0.180692, 0.000213142, 0.142628, 0.125427, 0.100379, 0.0134767, 0.00870885, -0.166143, -0.0264429, 0.105878, 0.00147119, 0.0212532, -0.0450881},
    {-0.120999, 0.0571289, 0.0998271, -0.052434, -0.14173, -0.0893151, -0.0765896, -0.176613, 0.103261, -0.117876, 0.257788, -0.130373, -0.200838, -0.0771964, -0.0673978, 0.220967, -0.232715, -0.136761, -0.0855167, 0.00471388, 0.0506463, 0.0259615, 0.0330275, -0.0159807, -0.0906861, -0.373074, -0.0782295, -0.114117, 0.0113052, -0.0264268, -0.0464206, 0.0334541, -0.207841, -0.110833, 0.0689938, 0.0550363, -0.0392009, -0.0742869, 0.141574, -0.0726057, -0.252269, -0.00596735, 0.0738808, 0.179473, 0.194298, 0.0361882, 0.0151976, -0.153536, 0.126189, -0.19106, 0.0057598, 0.0871133, 0.0367361, 0.0552625, 0.0149207, -0.128133, 0.0296922, 0.191249, -0.139456, -0.00491761, 0.14801, -0.116062, -0.0363894, -0.0617599, 0.220187, 0.0455419, -0.105509, -0.151176, 0.122882, -0.100758, -0.0143762, 0.0238365, -0.136616, -0.163048, -0.280892, -0.0316741, 0.381637, 0.00540447, -0.169948, 0.0103986, -0.0334376, 0.0412415, 0.114936, 0.120011, 0.0218304, 0.00705745, -0.0821894, -0.0223583, 0.193955, -0.114422, 0.0628375, 0.234044, -0.0476202, 0.0118247, 0.0549456, 0.0162443, -0.0893718, 0.0278989, -0.104214, 0.0209576, 0.0185992, -0.0357159, -0.0141204, 0.0748953, -0.106736, 0.0723385, -0.0416188, 0.0617989, 0.0259566, -0.115909, 0.000833431, -0.112216, 0.123481, -0.177156, 0.172822, 0.178622, 0.0294017, 0.154123, 0.0604484, 0.0632063, -0.0320832, 0.0262824, -0.229972, 0.00182695, 0.110385, -0.0296462, 0.0197107, -0.0254563},
};*/

/*std::vector<double> test00 = {-0.13449, 0.135767, 0.0543103, 0.00538723, -0.115969, -0.0361467, -0.0519602, -0.156342, 0.0458966, 0.016311, 0.264109, -0.104796, -0.321962, 0.00856461, -0.12671, 0.105556, -0.144141, -0.105265, -0.0807759, -0.0484962, 0.0165312, -0.0262091, 0.0163267, 0.0284821, -0.00441116, -0.328627, -0.0563466, -0.0947483, 0.119196, -0.109876, -0.0297525, 0.00919881, -0.121137, -0.114734, 0.0334566, 0.125127, -0.0390485, -0.0645584, 0.272041, -0.0622663, -0.107865, -0.00584847, 0.0691733, 0.295653, 0.152317, 0.0917598, 0.0268174, -0.0530228, 0.0719688, -0.28086, 0.0826676, 0.166326, 0.161047, 0.0587466, 0.0745787, -0.159634, -0.0220818, 0.0889814, -0.121166, 0.0214681, 0.0855194, 0.00349782, -0.0348935, -0.103057, 0.17085, 0.0761018, -0.0503001, -0.0744528, 0.199122, -0.153348, -0.113036, -0.010562, -0.0864006, -0.113698, -0.235269, 0.0358717, 0.372882, 0.139316, -0.172335, 0.0143715, -0.0217375, -0.0651269, 0.0358975, -0.0464502, -0.0793241, -0.0122178, -0.123952, -0.00489768, 0.164078, -0.0663975, 0.013798, 0.142679, 0.0347793, 0.0397555, 0.0943212, 0.0699233, -0.0691427, 0.00829752, -0.186369, -0.0073045, 0.106215, -0.0554534, 0.0353337, 0.0909476, -0.186064, 0.0833709, -0.0167911, -0.029757, 0.0287787, 0.00165267, -0.0887326, -0.0332299, 0.238682, -0.207301, 0.180722, 0.216773, -0.0269135, 0.0710185, 0.0900128, 0.0280011, 0.0639316, 0.000865693, -0.178035, -0.181219, 0.0147542, -0.0101232, -0.0593768, 0.0677032, };
std::vector<double> test01 = {-0.101429, 0.136431, 0.0454709, -0.0939419, -0.0724709, -0.0621933, -0.0471178, -0.12532, 0.107738, -0.0604801, 0.330023, -0.029556, -0.180469, -0.155341, 0.00177305, 0.135168, -0.210094, -0.0965532, -0.0690687, 0.0242426, 0.0788501, -0.0594601, 0.0396764, -0.0137328, -0.0660228, -0.371847, -0.10975, -0.104467, 0.0785306, -0.0797105, -0.0379765, -0.0591423, -0.180304, -0.123294, 0.0510178, 0.0470444, -0.0436093, -0.0364558, 0.178629, -0.0583961, -0.205513, 0.036915, 0.0880085, 0.22311, 0.206403, 0.116782, 0.0553952, -0.108484, 0.157496, -0.105017, 0.079722, 0.114558, 0.184691, 0.0702143, 0.0119959, -0.112653, 0.0496144, 0.152839, -0.244021, 0.00968685, 0.160467, -0.0587186, -0.037272, -0.034166, 0.219511, 0.107122, -0.129249, -0.20956, 0.14826, -0.141396, -0.0597541, 0.0149238, -0.152748, -0.155213, -0.249023, 0.00113933, 0.297554, 0.0948173, -0.162169, -0.0309031, -0.0709004, -0.0183375, 0.048984, 0.0858797, -0.04277, 0.00750834, -0.0915507, -0.0435502, 0.186794, -0.0560488, 0.0222456, 0.184955, -0.0117741, 0.02312, 0.00461461, 0.0205116, -0.132194, 0.0738715, -0.106056, 0.00952845, -0.0391546, -0.0747313, 0.0084279, 0.090696, -0.177986, 0.168131, -0.0393139, 0.0673088, -0.0342016, -0.0512654, -0.0129092, -0.0722354, 0.0885344, -0.208359, 0.252788, 0.213215, 0.0980301, 0.0993239, 0.0883514, 0.0458915, 0.0329974, -0.000707327, -0.234946, -0.0590889, 0.0166818, -0.0704486, 0.0965144, 0.00290305, };
distance = Vector128Distance(test00, test01);
std::cout << "specific distance = " << distance <<std::endl;*/

/*clock_gettime(CLOCK_REALTIME, &t1);
count = 0;
for (int i = 0; i < vector_XYZ.size(); i++)
{
    for (int j = i; j < vector_XYZ.size(); j++)
    {
        distance = Vector3Distance(vector_XYZ[i], vector_XYZ[j]);
        count++;

        if (distance <= 0.38)
            numpair.push_back(sample_pair(i,j));
    }
}

clusterNum = chinese_whispers(numpair, numlabel);

vector_Pair.clear();
for (size_t cluster_id = 0; cluster_id < clusterNum; cluster_id++)
{
    std::vector<int> temp;
    for (size_t k = 0; k < numlabel.size(); k++)
    {
        if ( numlabel[k] == cluster_id )
            vector_Pair[cluster_id].push_back(k);
    }
}

clock_gettime(CLOCK_REALTIME, &t2);
elapsed = ((t2.tv_sec - t1.tv_sec) * 1000000000 + t2.tv_nsec - t1.tv_nsec) / 1000000000.0;
printf("elapsed time=%f\n", elapsed);

// Display the grouped categories
for (auto& group : vector_Pair)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& idx_numspos : group.second)
    {
        std::cout << "{";
        for (int i=0; i<vector_XYZ[idx_numspos].size(); i++)
            std::cout << vector_XYZ[idx_numspos][i] << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

std::cout << std::endl;
std::cout << "counts:" << count << std::endl;*/

///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// ///////////////////////////////////////////////////////// std::sort(vector_XYZ.begin(), vector_XYZ.end(), compareOriginDistance_Ascending); /*for (auto& oneindex : reorderVector) { std::cout << "{"; for(auto& vit : oneindex) std::cout << vit << ", ";

    std::cout << "}" << std::endl;
}
std::cout << std::endl;*/

vector_Map = getVectorMap(vector_XYZ);
/*for (auto& group : vector_Map)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& onevector : group.second)
    {
        std::cout << "{";

        for(auto& vit : onevector)
            std::cout << vit << ", ";

        std::cout << "}";
        std::cout << std::endl;
    }
}*/

vgret = getVectorReorder(vector_Map);

// Display the grouped categories
for (auto& group : vgret)
{
    std::cout << "Group " << group.first << ": ";
    std::cout << std::endl;
    for (auto& onevector : group.second)
    {
        std::cout << "{";
        for(auto& vit : onevector)
            std::cout << vit << ", ";
        std::cout << "}";
        std::cout << std::endl;
    }
}

std::cout << "counts:" <<  s_distcount << std::endl;

}

fatalfeel commented 1 year ago

std::vector<std::vector> vectorXYZ = { {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594}, {-0.122809, 0.141884, 0.0834277, -0.024698, 0.0177337, -0.0565662, -0.0488287, -0.167187, 0.129479, -0.16477, 0.235103, 0.0143175, -0.190848, -0.17434, 0.0239052, 0.109071, -0.1412, -0.152348, -0.130039, 0.00932468, 0.0635409, -0.0535787, 0.0321519, -0.0552175, -0.125623, -0.415993, -0.142093, -0.0782209, -0.0423333, -0.0628295, -0.00478314, -0.0147723, -0.208385, -0.097194, -0.0340456, 0.0250795, 0.0476099, 0.0445404, 0.155967, -0.0330071, -0.211093, 0.0635749, 0.0551622, 0.248809, 0.217021, -0.00950041, 0.0644111, -0.0741558, 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0.0182193, 0.0110646, -0.0452993, -0.0466727, 0.000355807, -0.0384195, -0.171479, 0.102824, -0.0606375, 0.259942, -0.0872932, -0.209607, -0.142605, 0.00019541, 0.153501, -0.144962, -0.0818486, -0.0490099, 0.00406918, 0.0369169, -0.038073, 0.0849571, 0.126583, -0.127964, -0.317237, -0.131608, -0.118658, 0.0251461, -0.0994083, -0.0427236, 0.089688, -0.101114, -0.0164903, 0.0156337, 0.0682156, -0.016543, -0.0737312, 0.191811, -0.0110863, -0.176301, -0.02407, -0.028001, 0.226518, 0.175721, 0.0553716, 0.0499403, -0.085751, 0.118366, -0.16696, 0.0620224, 0.106225, 0.087934, 0.0194375, -0.00761475, -0.152778, 0.000774691, 0.0795807, -0.132125, 0.0169124, 0.0237312, -0.110985, -0.0220941, -0.0819724, 0.183311, 0.110921, -0.129443, -0.155414, 0.131917, -0.120448, -0.0565624, 0.0423732, -0.189654, -0.146513, -0.316214, -0.00580499, 0.355408, 0.0613392, -0.221853, -0.0236515, -0.0819374, 0.0273423, 0.0445918, 0.117853, -0.0322622, -0.0354672, -0.12111, -0.0391914, 0.142866, -0.109375, -0.0230447, 0.199058, -0.0382341, 0.0750576, 0.0317835, 0.0559159, -0.0895886, 0.0753566, -0.0377265, 0.0266127, 0.062714, -0.0399351, 0.0489263, 0.107276, -0.1593, 0.189687, -0.00384177, 0.0358434, 0.0820551, 0.014413, -0.135657, -0.0945056, 0.16793, -0.24496, 0.136804, 0.182464, 0.071957, 0.113234, 0.0679663, 0.166414, -0.056505, 0.0386044, -0.189949, -0.00757538, 0.085717, -0.0172627, -0.0110463, 0.013099}, };

These 128d vectors out from anet

Chinese cluster algorithm will lost one vector into cluster

that's it~

fatalfeel commented 1 year ago

modify Hierarchical Clustering Agglomerative for face 128d https://www.mediafire.com/file/l0wrg26gmtf7nep/cluster_number_test.cpp (from https://fatalfeel.blogspot.com/2013/12/opencv-and-dlib-training.html)

fatalfeel commented 1 year ago

////////////////////////////from chatgtp Chinese Whisper: the result same as HAC

include

include

include

include

double euclideanDistance(std::vector& p1, std::vector& p2) { double sum = 0.0; for (size_t i = 0; i < p1.size(); ++i) { double diff = p1[i] - p2[i]; sum += diff * diff; } return std::sqrt(sum); }

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

std::vector findNeighbors(const std::vector<std::vector>& vector_XY, int index_parent, double threshold) { std::vector neighbors; for (size_t index_current = 0; index_current < vector_XY.size(); index_current++) { if (index_current == index_parent) continue;

    //double distance = euclideanDistance(vector_XY[index_current], vector_XY[index_parent]);
    double distance = Vector128Distance(vector_XY[index_current], vector_XY[index_parent]);
    if (distance < threshold) {
        neighbors.push_back(index_current);
    }
}

return neighbors;

}

std::unordered_map<int, long> chineseWhisper(const std::vector<std::vector>& vector_XY, double threshold, int maxIterations) { int maxGroupNum; int maxGroupCount;

std::vector<int>                neighbors;
std::unordered_map<int, long>   umap_clusters;  //<int, int> = xy_index, group_num
std::unordered_map<int, long>   umap_freqCount; //<int, int> = group_num, count

// Initialize each point to its own cluster
for (size_t i = 0; i < vector_XY.size(); ++i) {
    umap_clusters[i] = i;
}

bool converged = false;
int iteration = 0;

while (!converged && iteration < maxIterations) {
    converged = true;

    for (size_t i = 0; i < vector_XY.size(); ++i)
    {
        neighbors = findNeighbors(vector_XY, i, threshold);

        // Find the most frequent cluster among neighbors
        umap_freqCount.clear();
        for (int one_neighbor : neighbors)
        {
            int group_num = umap_clusters[one_neighbor];
            umap_freqCount[group_num]++;
        }

        //default
        maxGroupNum     = umap_clusters[i];
        maxGroupCount   = 0;

        //set group num
        for (auto& node : umap_freqCount)
        {
            if (node.second > maxGroupCount)
            {
                maxGroupNum     = node.first;
                maxGroupCount   = node.second;
            }
        }

        // Update the cluster assignment
        if (umap_clusters[i] != maxGroupNum)
        {
            umap_clusters[i]    = maxGroupNum;
            converged           = false;
        }
    }

    ++iteration;
}

return umap_clusters;

}

int main() { //std::vector<std::vector> vector_XY = { { 1, 1 },{ 2, 2 },{ 3, 3 },{ 4, 4 }, { 7, 7 },{ 8, 8 },{ 12, 12 },{ 13, 13 } }; double threshold = 0.38; int maxIterations = 100;

std::vector<std::vector<double>> vector_XY =
{
   {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
   {-0.122809, 0.141884, 0.0834277, -0.024698, 0.0177337, -0.0565662, -0.0488287, -0.167187, 0.129479, -0.16477, 0.235103, 0.0143175, -0.190848, -0.17434, 0.0239052, 0.109071, -0.1412, -0.152348, -0.130039, 0.00932468, 0.0635409, -0.0535787, 0.0321519, -0.0552175, -0.125623, -0.415993, -0.142093, -0.0782209, -0.0423333, -0.0628295, -0.00478314, -0.0147723, -0.208385, -0.097194, -0.0340456, 0.0250795, 0.0476099, 0.0445404, 0.155967, -0.0330071, -0.211093, 0.0635749, 0.0551622, 0.248809, 0.217021, -0.00950041, 0.0644111, -0.0741558, 0.130536, -0.150162, 0.0454363, 0.0712427, 0.181238, 0.0244739, 0.1227, -0.0829122, 0.0271064, 0.107598, -0.178865, 0.0838384, 0.130686, -0.0890263, -0.0846723, 0.0443754, 0.116611, 0.0607178, -0.0848899, -0.158509, 0.175877, -0.091944, 0.0752838, 0.064769, -0.13667, -0.209451, -0.278074, 0.0388157, 0.396069, 0.0985305, -0.187861, 0.00272873, -0.115045, 0.00759091, 0.0929476, -0.0135563, -0.053188, 0.0110131, -0.108069, 0.113875, 0.196847, 0.0363506, -0.0278321, 0.190228, -0.016135, -0.0186574, 0.0398624, 0.0430936, -0.0728235, 0.0186825, -0.169696, 0.0589708, 0.0177984, -0.132982, -0.0278657, 0.0477713, -0.150841, 0.1162, 0.0068371, 0.0412291, -0.0295409, 0.021594, -0.11953, -0.0136774, 0.109455, -0.217901, 0.175909, 0.194058, -0.0119731, 0.0930409, 0.0532424, 0.0303565, -0.0040981, -0.0295382, -0.186952, -0.0768026, 0.0278174, -0.0122376, 0.0969743, 0.00307787},
   {-0.130142, 0.107555, 0.0572895, -0.0845698, -0.12549, -0.034339, -0.0467723, -0.164135, 0.145387, -0.146743, 0.174315, -0.0318005, -0.172607, -0.101449, -0.0940405, 0.177059, -0.135336, -0.148106, -0.056861, -0.0382697, 0.102158, 0.0209301, 0.0115177, 0.0100246, -0.13297, -0.326479, -0.133685, -0.081091, 0.0400336, -0.0240793, -0.0405149, -0.00885114, -0.233745, -0.0830078, 0.0250101, 0.043742, -0.0131077, -0.0413116, 0.166192, 0.0131113, -0.23724, 0.0351128, 0.0428485, 0.222982, 0.194576, 0.0199175, 0.0339355, -0.113281, 0.15135, -0.11284, 0.0723526, 0.113935, 0.122559, 0.0563529, 0.0387194, -0.0898886, 0.0267035, 0.191483, -0.1494, 0.0588322, 0.123158, -0.0707478, -0.00723561, -0.0496402, 0.168517, 0.0651333, -0.083626, -0.184424, 0.201588, -0.146728, -0.0284528, 0.0278722, -0.145421, -0.157506, -0.274791, 0.0225294, 0.380545, 0.194099, -0.185368, -0.0184206, -0.0614196, 0.038362, 0.138265, 0.085994, -0.0319764, 0.0302294, -0.0496441, -0.00648053, 0.249367, -0.00993198, -0.0543855, 0.253636, 0.00113154, 0.0443343, 0.012549, -0.0368349, -0.101751, 0.00487958, -0.127768, -0.00746846, -0.0324014, -0.0477133, 0.00651821, 0.147431, -0.126395, 0.144034, -0.0331465, 0.062365, -0.0841882, 0.0184607, -0.115114, -0.0362254, 0.121352, -0.120006, 0.229884, 0.172513, 0.0578926, 0.0942701, 0.154926, 0.0281702, 0.0246513, -0.039883, -0.181112, -0.0562719, 0.131885, -0.0961102, 0.153769, 0.0120704},
   {-0.127858, 0.00730303, 0.00490271, -0.107261, -0.0890459, -0.0941798, -0.00644781, -0.21063, 0.1624, -0.148379, 0.236062, -0.112629, -0.174543, -0.108475, -0.0577822, 0.196871, -0.279764, -0.159019, -0.0259959, -0.0225946, 0.0128491, -0.00963796, 0.0674975, 0.0790626, -0.153605, -0.419052, -0.112466, -0.0768207, -0.000853801, -0.00158204, 0.0379006, 0.177633, -0.224044, -0.0595616, -0.00961656, 0.0900579, 0.0370869, -0.0527091, 0.207512, -0.00724315, -0.270678, 0.047113, 0.0788909, 0.263494, 0.133682, 0.011274, 0.0134011, -0.050655, 0.0874453, -0.142138, -0.00569062, 0.0728319, 0.0604688, -0.0604389, -0.022393, -0.109376, 0.0239777, 0.129457, -0.205887, -0.00965135, 0.096523, -0.124476, 0.0079135, -0.0407708, 0.194015, 0.0873009, -0.080362, -0.117395, 0.170097, -0.121238, -0.036494, 0.00980805, -0.130165, -0.158267, -0.338711, -0.0192549, 0.384294, 0.026719, -0.110668, 0.058778, -0.00929742, -0.0161355, 0.0912385, 0.11896, -0.0695814, 0.0216341, -0.107535, 0.0196625, 0.202385, 0.0362525, -0.0565165, 0.212705, -0.0300995, -0.00490006, 0.060506, 0.0280855, -0.0950138, 0.0540323, -0.135612, 0.0492903, 0.0463888, -0.0672418, -0.0231786, 0.124676, -0.185619, 0.130382, -0.0234665, -0.0223005, 0.0139654, 0.0438819, -0.065526, -0.0671872, 0.107503, -0.217735, 0.136946, 0.198381, 0.0595057, 0.179289, 0.0797474, 0.0293032, -0.0526457, 0.0394151, -0.231285, -0.0642926, 0.129709, -0.0697159, 0.156028, 0.0535734},
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   {-0.0916301, 0.0743129, 0.0741697, 0.00337872, -0.0954873, -0.0721012, -0.0803096, -0.136819, 0.0629979, -0.0762493, 0.248069, -0.0547102, -0.180226, -0.148588, 0.0277657, 0.144394, -0.143602, -0.112268, -0.0392452, 0.0219722, 0.0801767, -0.0435615, 0.11222, 0.0477832, -0.17988, -0.405011, -0.0831553, -0.100603, -0.0408181, -0.0702085, -0.0263202, 0.108104, -0.148659, -0.0268779, 0.005535, 0.0877085, -0.0116396, -0.0388273, 0.240434, -0.0196645, -0.255398, -0.0149732, 0.00379848, 0.256487, 0.197436, -0.0274119, 0.0936544, -0.0428689, 0.0837315, -0.180232, 0.0326604, 0.131094, 0.0901353, -0.00573682, -0.0151899, -0.0740999, 0.00922925, 0.0673747, -0.159551, -0.01417, 0.0882565, -0.0874703, -0.0650582, -0.0480134, 0.19574, 0.126893, -0.107249, -0.177972, 0.0711248, -0.147108, -0.0848871, 0.0496873, -0.201117, -0.186022, -0.344314, -0.0424845, 0.334056, 0.0558526, -0.220083, 0.00147001, -0.079201, 0.000240899, 0.090872, 0.109572, -0.024697, 0.0702074, -0.102598, 0.0625848, 0.213145, -0.0934325, -0.0641467, 0.216044, 0.0309816, 0.0685029, 0.036331, 0.00190075, -0.00793565, 0.0518055, -0.141416, 0.0508154, 0.056066, -0.0227241, 0.0174942, 0.0925652, -0.188056, 0.134942, 0.00672168, 0.0388115, 0.038765, -0.0102831, -0.193823, -0.0985654, 0.139888, -0.201015, 0.129101, 0.217166, 0.0802248, 0.0830562, 0.141532, 0.0278758, 8.72836e-06, 0.0213799, -0.192896, 0.0207353, 0.111057, -0.0098425, 0.0509902, 0.0034256},
   {-0.0741418, 0.0791224, 0.0740489, 0.0178405, -0.0752271, -0.0114142, 0.0147992, -0.147239, 0.133477, -0.0387406, 0.235312, -0.0370632, -0.192054, -0.167837, 0.0204839, 0.165574, -0.164519, -0.15228, -0.09185, 0.0222474, 0.0493721, -0.0739616, 0.150537, 0.0153057, -0.108782, -0.376759, -0.142987, -0.132778, 0.0731146, -0.0624327, -0.0567171, 0.0417157, -0.171107, -0.0464573, -0.00360849, 0.0693255, -0.0291116, -0.0689693, 0.236886, -0.00248763, -0.242616, -0.0197954, -0.0146659, 0.185207, 0.227818, 0.0240656, 0.0669767, -0.0474951, 0.0732038, -0.172222, 0.0834158, 0.127552, 0.150166, 0.0050067, -0.0303582, -0.0915942, -0.0061955, 0.0822166, -0.143945, 0.00802993, 0.0726668, -0.147219, -0.0813509, 0.00798004, 0.161504, 0.131844, -0.0653654, -0.203974, 0.133578, -0.14768, -0.0326288, 0.0757403, -0.207646, -0.13536, -0.324897, -0.0199287, 0.473343, 0.0235187, -0.160997, -0.019061, -0.128479, 0.01569, 0.0320582, 0.13718, -0.0701632, 0.0166919, -0.164733, 0.0207097, 0.17018, -0.145939, -0.0568961, 0.184223, -0.00553707, 0.115999, -0.00470358, -0.0223718, 0.0268668, 0.0479731, -0.0712002, -0.0184448, 0.0345733, -0.00900334, 0.00551786, 0.0669474, -0.143414, 0.0534026, 0.0129054, 0.0303076, 0.0565679, -0.0403045, -0.126619, -0.126732, 0.146101, -0.209943, 0.117068, 0.246301, 0.00654363, 0.0632229, 0.108948, 0.110958, 0.0138581, 0.00817229, -0.197267, 0.0505428, 0.0914466, 0.0142066, 0.0101859, 0.0159471},
   {-0.0506337, 0.0182193, 0.0110646, -0.0452993, -0.0466727, 0.000355807, -0.0384195, -0.171479, 0.102824, -0.0606375, 0.259942, -0.0872932, -0.209607, -0.142605, 0.00019541, 0.153501, -0.144962, -0.0818486, -0.0490099, 0.00406918, 0.0369169, -0.038073, 0.0849571, 0.126583, -0.127964, -0.317237, -0.131608, -0.118658, 0.0251461, -0.0994083, -0.0427236, 0.089688, -0.101114, -0.0164903, 0.0156337, 0.0682156, -0.016543, -0.0737312, 0.191811, -0.0110863, -0.176301, -0.02407, -0.028001, 0.226518, 0.175721, 0.0553716, 0.0499403, -0.085751, 0.118366, -0.16696, 0.0620224, 0.106225, 0.087934, 0.0194375, -0.00761475, -0.152778, 0.000774691, 0.0795807, -0.132125, 0.0169124, 0.0237312, -0.110985, -0.0220941, -0.0819724, 0.183311, 0.110921, -0.129443, -0.155414, 0.131917, -0.120448, -0.0565624, 0.0423732, -0.189654, -0.146513, -0.316214, -0.00580499, 0.355408, 0.0613392, -0.221853, -0.0236515, -0.0819374, 0.0273423, 0.0445918, 0.117853, -0.0322622, -0.0354672, -0.12111, -0.0391914, 0.142866, -0.109375, -0.0230447, 0.199058, -0.0382341, 0.0750576, 0.0317835, 0.0559159, -0.0895886, 0.0753566, -0.0377265, 0.0266127, 0.062714, -0.0399351, 0.0489263, 0.107276, -0.1593, 0.189687, -0.00384177, 0.0358434, 0.0820551, 0.014413, -0.135657, -0.0945056, 0.16793, -0.24496, 0.136804, 0.182464, 0.071957, 0.113234, 0.0679663, 0.166414, -0.056505, 0.0386044, -0.189949, -0.00757538, 0.085717, -0.0172627, -0.0110463, 0.013099},
};

std::unordered_map<int, long> clusters = chineseWhisper(vector_XY, threshold, maxIterations);

for (auto& pointClusterPair : clusters)
{
    std::cout << pointClusterPair.second << ". {";
    for (auto& onevector : vector_XY[pointClusterPair.first])
        std::cout << onevector << ", ";
    std::cout << "}" << std::endl;
}

return 0;

}

//////////////////////result same as Hierarchical agglomerative clustering (HAC)

  1. {-0.0870341, 0.132455, 0.0377385, -0.0863609, -0.080264, -0.0696672, -0.0463324, -0.134765, 0.118001, -0.0683511, 0.323536, -0.0289626, -0.16187, -0.151928, 0.00135129, 0.128619, -0.216957, -0.104474, -0.0618603, 0.0202411, 0.0740284, -0.0655336, 0.0417513, -0.0156198, -0.0659297, -0.364725, -0.11644, -0.108196, 0.0902467, -0.0894608, -0.0497683, -0.0528107, -0.196105, -0.140476, 0.054013, 0.0430962, -0.0265678, -0.0323258, 0.173099, -0.0596527, -0.192517, 0.0505832, 0.0883283, 0.21358, 0.210763, 0.121535, 0.0396708, -0.115944, 0.166951, -0.0981052, 0.0729366, 0.112695, 0.183109, 0.0760816, -0.000555654, -0.0987974, 0.0533802, 0.133428, -0.240769, 0.00780147, 0.168464, -0.0495153, -0.0452943, -0.0277928, 0.220089, 0.104242, -0.118118, -0.211169, 0.141521, -0.143251, -0.0671872, 0.0101379, -0.147469, -0.14075, -0.236201, -0.00484477, 0.306387, 0.0919039, -0.169813, -0.0252979, -0.0849125, -0.0175008, 0.0471315, 0.0719539, -0.0357105, 0.00750187, -0.0920192, -0.0382614, 0.192626, -0.0548417, 0.0213941, 0.18122, -0.0144798, 0.0403539, 0.0107551, 0.0289004, -0.132128, 0.0720871, -0.112661, -0.00122857, -0.0280466, -0.0596347, 0.00191765, 0.097825, -0.176455, 0.173006, -0.0426155, 0.0679425, -0.0265626, -0.0447446, -0.00596849, -0.0719273, 0.0804739, -0.210111, 0.260635, 0.205839, 0.0815478, 0.0926372, 0.0731819, 0.0475103, 0.0265419, 0.000553765, -0.231507, -0.073622, 0.0136529, -0.066276, 0.093881, -0.00216521, }

  2. {-0.0992979, 0.122165, 0.0912602, -0.0321985, -0.0684462, -0.0849711, -0.0489946, -0.135503, 0.0917729, -0.0578902, 0.272745, -0.0926052, -0.136296, -0.152289, -0.0184117, 0.0929956, -0.152167, -0.0617913, -0.0333641, 0.0428432, 0.0490224, -0.0422929, 0.0884286, 0.0014897, -0.0675949, -0.408781, -0.152954, -0.114768, 0.108607, -0.109054, -0.0608561, -0.0181542, -0.151239, -0.16152, 0.00403405, 0.0566143, -0.00598553, -0.00146211, 0.182004, -0.0298069, -0.193664, 0.0537602, 0.0379817, 0.282349, 0.214286, 0.138912, 0.0153926, -0.0876147, 0.13333, -0.127702, 0.0757071, 0.116368, 0.174625, 0.0508582, 0.0332182, -0.0451843, 0.042498, 0.0887166, -0.255065, 0.0156304, 0.135325, 0.00735303, 0.0308902, -0.0187245, 0.189613, 0.0918508, -0.0912196, -0.158444, 0.146944, -0.176383, -0.0320568, 0.020041, -0.116278, -0.137768, -0.26683, -0.00472715, 0.286731, 0.127513, -0.187165, -0.0619743, -0.14029, -0.0463117, 0.0542244, 0.0365646, -0.00987529, -0.0291819, -0.0973244, -0.0714808, 0.154462, -0.0700323, 0.015624, 0.179265, 0.0213346, 0.038605, 0.000864326, 0.0487321, -0.174079, 0.0962759, -0.133794, 0.0215799, -0.0298369, -0.0343859, 0.019338, 0.126402, -0.212536, 0.225471, -0.00803165, 0.00834702, 0.00257323, -0.0130928, -0.0553833, -0.078879, 0.123541, -0.224206, 0.203897, 0.223088, 0.0462511, 0.0959692, 0.0667733, 0.0464888, 0.0130222, 0.00502837, -0.181078, -0.0887057, 0.000660131, -0.0807323, 0.0179886, 0.022814, }

  3. {-0.128572, 0.0973682, 0.0867608, -0.0376779, -0.15026, -0.067252, -0.0249867, -0.180931, 0.111005, -0.145676, 0.274965, -0.0804217, -0.239929, -0.0838986, -0.0614532, 0.223914, -0.197584, -0.168018, -0.076038, -0.00738627, 0.0597828, -0.00679871, 0.0386248, 0.00801556, -0.0688232, -0.350878, -0.0427477, -0.0272239, -0.0232097, -0.0299352, -0.034983, 0.0572654, -0.243263, -0.106614, 0.0698775, 0.106294, -0.0264911, -0.0556516, 0.192935, -0.0870283, -0.256833, -0.00153754, 0.114026, 0.205701, 0.182697, -0.0306828, 0.00809767, -0.183568, 0.133403, -0.241614, -0.00562801, 0.149465, 0.0432816, 0.0398056, -0.0312084, -0.1105, -0.00262913, 0.174927, -0.0802645, -0.014896, 0.156133, -0.111117, -0.0773021, -0.0915959, 0.206589, 0.0374244, -0.142821, -0.158457, 0.0958246, -0.0908664, -0.0418441, 0.0285839, -0.144183, -0.185416, -0.281857, 0.0175398, 0.420626, -0.0017606, -0.182465, 0.0298958, -0.0872293, 0.0373133, 0.090707, 0.134021, 0.0284169, 0.00409463, -0.102585, 0.0471895, 0.225864, -0.117086, 0.0433835, 0.236, -0.00537327, 0.0370307, 0.0499216, 0.0921245, -0.0799572, 0.0298584, -0.191353, 0.021012, 0.0330286, -0.0616043, -0.0129402, 0.0904939, -0.146981, 0.0668456, -0.0311388, 0.0485171, 0.0754309, -0.0950844, -0.0432588, -0.13074, 0.0934741, -0.171577, 0.188043, 0.177637, 0.000807306, 0.14775, 0.122888, 0.102616, 0.0162509, 0.00551085, -0.173046, -0.0234691, 0.104719, 0.00359475, 0.0193932, -0.0480963, }

  4. {-0.090799, 0.0809553, 0.0759825, -0.0463626, -0.111534, -0.0545845, -0.0859236, -0.206957, 0.137534, -0.102071, 0.251071, -0.108932, -0.180827, -0.0782948, -0.0841926, 0.228998, -0.218102, -0.134776, -0.060099, 0.0174231, 0.0375845, -0.00156465, 0.0259291, 0.00259578, -0.0714218, -0.361112, -0.0811657, -0.0958543, 0.0238057, -0.030626, -0.0661701, 0.0917842, -0.206404, -0.0817531, 0.0562123, 0.0634374, -0.0189609, -0.0629081, 0.123064, -0.101644, -0.254773, 0.0129178, 0.0808249, 0.193162, 0.205865, 0.00972574, 0.0207571, -0.144906, 0.0755426, -0.147118, -0.0300265, 0.101131, 0.0524244, 0.0166091, 0.00339021, -0.166959, 0.00409083, 0.145328, -0.113452, -0.00029328, 0.123199, -0.126382, -0.0562261, -0.074728, 0.215938, 0.0421233, -0.10298, -0.170908, 0.145482, -0.0789228, 0.0169046, 0.0310389, -0.177285, -0.197749, -0.280558, -0.0403481, 0.383077, 0.0305359, -0.175888, 0.0779589, -0.0423169, 0.0553363, 0.095131, 0.130145, 0.0314053, 0.0128694, -0.0979745, 0.00303288, 0.176901, -0.115896, 0.0479244, 0.202174, -0.077142, -0.00887056, -0.00225188, 0.0118, -0.0701373, 0.0552305, -0.131145, -0.00932551, 0.0233421, -0.0201789, 0.00118736, 0.111896, -0.124617, 0.04992, -0.00945022, 0.0786036, 0.0560023, -0.0662577, -0.00143249, -0.11028, 0.143417, -0.19958, 0.177899, 0.182281, 0.0361073, 0.13681, 0.064873, 0.0923111, -0.00864414, 0.0141113, -0.238541, 0.0172291, 0.0908509, -0.0467091, 0.0198474, -0.00433859, }

  5. {-0.0905051, 0.00163369, 0.0535583, -0.0640821, -0.0805288, -0.0890661, -0.0340162, -0.192739, 0.164495, -0.113413, 0.233835, -0.0779192, -0.189857, -0.0858655, -0.0487517, 0.147014, -0.215897, -0.103606, -0.0712985, 0.00700117, 0.0668264, -0.0235734, 0.0690326, 0.026202, -0.115898, -0.384459, -0.112881, -0.0905679, -0.0153887, 0.0114962, -0.0201105, 0.0714012, -0.183783, -0.0746448, 0.024892, 0.0457105, -0.0202484, -0.0655856, 0.200638, -0.0854433, -0.312505, -0.00825135, 0.0735555, 0.170051, 0.175302, -0.00497253, 0.00517798, -0.129615, 0.167219, -0.142599, 0.00237514, 0.138755, 0.0646658, 0.00675762, 0.00139385, -0.0837034, 0.00909007, 0.170721, -0.144759, -0.0197719, 0.133594, -0.136821, -0.0325649, -0.0840999, 0.140316, 0.0897723, -0.101888, -0.181625, 0.128187, -0.146947, -0.003121, 0.0648141, -0.162793, -0.21874, -0.270899, -0.0528614, 0.349046, 0.0430693, -0.147338, 0.0151391, -0.0933118, 0.038197, 0.138434, 0.118174, 0.0280101, 0.0494065, -0.101154, -0.0237216, 0.215073, -0.0925647, 0.0155855, 0.242506, -0.0163804, 0.0374359, 0.0312551, 0.0249686, -0.0933276, 0.0633129, -0.158089, 0.0590632, 0.0240139, -0.0138454, 0.0238764, 0.0534265, -0.127014, 0.103142, 0.00471741, 0.0667835, 0.0666634, -0.0687426, -0.047581, -0.138089, 0.12435, -0.185108, 0.148363, 0.140487, 0.0554305, 0.150784, 0.0657144, 0.0799364, -0.0527384, -0.012457, -0.229388, 0.026468, 0.105851, -0.0175102, 0.0516422, -0.0365241, }

include

include

include

include

double euclideanDistance(std::vector& p1, std::vector& p2) { double sum = 0.0; for (size_t i = 0; i < p1.size(); ++i) { double diff = p1[i] - p2[i]; sum += diff * diff; } return std::sqrt(sum); }

double Vector128Distance(std::vector v0, std::vector v1) { size_t size; size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = v0[idx] - v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

std::vector findNeighbors(const std::vector<std::vector>& vector_XY, int index_parent, double threshold) { std::vector neighbors; for (size_t index_current = 0; index_current < vector_XY.size(); index_current++) { if (index_current == index_parent) continue;

    //double distance = euclideanDistance(vector_XY[index_current], vector_XY[index_parent]);
    double distance = Vector128Distance(vector_XY[index_current], vector_XY[index_parent]);
    if (distance < threshold) {
        neighbors.push_back(index_current);
    }
}

return neighbors;

}

std::unordered_map<int, long> chineseWhisper(const std::vector<std::vector>& vector_XY, double threshold, int maxIterations) { int maxGroupNum; int maxGroupCount;

std::vector<int>                neighbors;
std::unordered_map<int, long>   umap_clusters;  //<int, int> = xy_index, group_num
std::unordered_map<int, long>   umap_freqCount; //<int, int> = group_num, count

// Initialize each point to its own cluster
for (size_t i = 0; i < vector_XY.size(); ++i) {
    umap_clusters[i] = i;
}

bool converged = false;
int iteration = 0;

while (!converged && iteration < maxIterations) {
    converged = true;

    for (size_t i = 0; i < vector_XY.size(); ++i)
    {
        neighbors = findNeighbors(vector_XY, i, threshold);

        // Find the most frequent cluster among neighbors
        umap_freqCount.clear();
        for (int one_neighbor : neighbors)
        {
            int group_num = umap_clusters[one_neighbor];
            umap_freqCount[group_num]++;
        }

        //default
        maxGroupNum     = umap_clusters[i];
        maxGroupCount   = 0;

        //set group num
        for (auto& node : umap_freqCount)
        {
            if (node.second > maxGroupCount)
            {
                maxGroupNum     = node.first;
                maxGroupCount   = node.second;
            }
        }

        // Update the cluster assignment
        if (umap_clusters[i] != maxGroupNum)
        {
            umap_clusters[i]    = maxGroupNum;
            converged           = false;
        }
    }

    ++iteration;
}

return umap_clusters;

}

int main() { //std::vector<std::vector> vector_XY = { { 1, 1 },{ 2, 2 },{ 3, 3 },{ 4, 4 }, { 7, 7 },{ 8, 8 },{ 12, 12 },{ 13, 13 } }; double threshold = 0.38; int maxIterations = 100;

std::vector<std::vector<double>> vector_XY =
{
   {-0.0657594, 0.0911007, -0.00555737, -0.0193744, -0.0818478, -0.0996826, -0.0574166, -0.135968, 0.114307, -0.053219, 0.228018, -0.0957294, -0.104611, -0.106841, -0.010412, 0.122668, -0.201091, -0.0675371, -0.0590985, -0.0528479, 0.0673416, -0.029715, 0.0728495, 0.0497927, -0.0872366, -0.325236, -0.0800661, -0.0966872, 0.172579, -0.00500544, -0.05104, 0.0460872, -0.18978, -0.172106, 0.0707662, 0.0708391, -0.0353767, -0.0506568, 0.216541, 0.00556121, -0.207937, 0.0360513, 0.0522725, 0.257174, 0.237937, 0.0139546, 0.0432731, -0.10577, 0.198914, -0.158893, 0.0484029, 0.115168, 0.132726, 0.0687606, -0.0117468, -0.105804, 0.0274803, 0.132344, -0.183709, 0.0250222, 0.122595, -0.0750794, -0.0243113, -0.0181865, 0.172087, 0.092783, -0.0818434, -0.20582, 0.125396, -0.0923952, -0.0132374, 0.0941682, -0.13674, -0.121274, -0.271214, 0.0466252, 0.465077, 0.0417323, -0.103339, 0.0263694, -0.0888323, -0.0445818, 0.087346, 0.124436, -0.0232556, -0.0223321, -0.048234, 0.028518, 0.153878, -0.091442, -0.0594145, 0.150308, -0.0180659, 0.104434, 0.0319766, 0.0796135, -0.153917, 0.0908913, -0.110806, -0.0233481, 0.0584948, -0.0458519, 0.0683573, 0.0846603, -0.143299, 0.16252, 0.00151325, 0.060551, 0.0527553, -0.0230687, -0.0333086, -0.0496755, 0.0902656, -0.202234, 0.214824, 0.15047, 0.0736998, 0.128972, 0.102644, 0.0329501, 0.060696, 0.0283906, -0.153184, -0.0179903, 0.0248442, 0.00977676, 0.0334449, -0.0101594},
   {-0.122809, 0.141884, 0.0834277, -0.024698, 0.0177337, -0.0565662, -0.0488287, -0.167187, 0.129479, -0.16477, 0.235103, 0.0143175, -0.190848, -0.17434, 0.0239052, 0.109071, -0.1412, -0.152348, -0.130039, 0.00932468, 0.0635409, -0.0535787, 0.0321519, -0.0552175, -0.125623, -0.415993, -0.142093, -0.0782209, -0.0423333, -0.0628295, -0.00478314, -0.0147723, -0.208385, -0.097194, -0.0340456, 0.0250795, 0.0476099, 0.0445404, 0.155967, -0.0330071, -0.211093, 0.0635749, 0.0551622, 0.248809, 0.217021, -0.00950041, 0.0644111, -0.0741558, 0.130536, -0.150162, 0.0454363, 0.0712427, 0.181238, 0.0244739, 0.1227, -0.0829122, 0.0271064, 0.107598, -0.178865, 0.0838384, 0.130686, -0.0890263, -0.0846723, 0.0443754, 0.116611, 0.0607178, -0.0848899, -0.158509, 0.175877, -0.091944, 0.0752838, 0.064769, -0.13667, -0.209451, -0.278074, 0.0388157, 0.396069, 0.0985305, -0.187861, 0.00272873, -0.115045, 0.00759091, 0.0929476, -0.0135563, -0.053188, 0.0110131, -0.108069, 0.113875, 0.196847, 0.0363506, -0.0278321, 0.190228, -0.016135, -0.0186574, 0.0398624, 0.0430936, -0.0728235, 0.0186825, -0.169696, 0.0589708, 0.0177984, -0.132982, -0.0278657, 0.0477713, -0.150841, 0.1162, 0.0068371, 0.0412291, -0.0295409, 0.021594, -0.11953, -0.0136774, 0.109455, -0.217901, 0.175909, 0.194058, -0.0119731, 0.0930409, 0.0532424, 0.0303565, -0.0040981, -0.0295382, -0.186952, -0.0768026, 0.0278174, -0.0122376, 0.0969743, 0.00307787},
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   {-0.0916301, 0.0743129, 0.0741697, 0.00337872, -0.0954873, -0.0721012, -0.0803096, -0.136819, 0.0629979, -0.0762493, 0.248069, -0.0547102, -0.180226, -0.148588, 0.0277657, 0.144394, -0.143602, -0.112268, -0.0392452, 0.0219722, 0.0801767, -0.0435615, 0.11222, 0.0477832, -0.17988, -0.405011, -0.0831553, -0.100603, -0.0408181, -0.0702085, -0.0263202, 0.108104, -0.148659, -0.0268779, 0.005535, 0.0877085, -0.0116396, -0.0388273, 0.240434, -0.0196645, -0.255398, -0.0149732, 0.00379848, 0.256487, 0.197436, -0.0274119, 0.0936544, -0.0428689, 0.0837315, -0.180232, 0.0326604, 0.131094, 0.0901353, -0.00573682, -0.0151899, -0.0740999, 0.00922925, 0.0673747, -0.159551, -0.01417, 0.0882565, -0.0874703, -0.0650582, -0.0480134, 0.19574, 0.126893, -0.107249, -0.177972, 0.0711248, -0.147108, -0.0848871, 0.0496873, -0.201117, -0.186022, -0.344314, -0.0424845, 0.334056, 0.0558526, -0.220083, 0.00147001, -0.079201, 0.000240899, 0.090872, 0.109572, -0.024697, 0.0702074, -0.102598, 0.0625848, 0.213145, -0.0934325, -0.0641467, 0.216044, 0.0309816, 0.0685029, 0.036331, 0.00190075, -0.00793565, 0.0518055, -0.141416, 0.0508154, 0.056066, -0.0227241, 0.0174942, 0.0925652, -0.188056, 0.134942, 0.00672168, 0.0388115, 0.038765, -0.0102831, -0.193823, -0.0985654, 0.139888, -0.201015, 0.129101, 0.217166, 0.0802248, 0.0830562, 0.141532, 0.0278758, 8.72836e-06, 0.0213799, -0.192896, 0.0207353, 0.111057, -0.0098425, 0.0509902, 0.0034256},
   {-0.0741418, 0.0791224, 0.0740489, 0.0178405, -0.0752271, -0.0114142, 0.0147992, -0.147239, 0.133477, -0.0387406, 0.235312, -0.0370632, -0.192054, -0.167837, 0.0204839, 0.165574, -0.164519, -0.15228, -0.09185, 0.0222474, 0.0493721, -0.0739616, 0.150537, 0.0153057, -0.108782, -0.376759, -0.142987, -0.132778, 0.0731146, -0.0624327, -0.0567171, 0.0417157, -0.171107, -0.0464573, -0.00360849, 0.0693255, -0.0291116, -0.0689693, 0.236886, -0.00248763, -0.242616, -0.0197954, -0.0146659, 0.185207, 0.227818, 0.0240656, 0.0669767, -0.0474951, 0.0732038, -0.172222, 0.0834158, 0.127552, 0.150166, 0.0050067, -0.0303582, -0.0915942, -0.0061955, 0.0822166, -0.143945, 0.00802993, 0.0726668, -0.147219, -0.0813509, 0.00798004, 0.161504, 0.131844, -0.0653654, -0.203974, 0.133578, -0.14768, -0.0326288, 0.0757403, -0.207646, -0.13536, -0.324897, -0.0199287, 0.473343, 0.0235187, -0.160997, -0.019061, -0.128479, 0.01569, 0.0320582, 0.13718, -0.0701632, 0.0166919, -0.164733, 0.0207097, 0.17018, -0.145939, -0.0568961, 0.184223, -0.00553707, 0.115999, -0.00470358, -0.0223718, 0.0268668, 0.0479731, -0.0712002, -0.0184448, 0.0345733, -0.00900334, 0.00551786, 0.0669474, -0.143414, 0.0534026, 0.0129054, 0.0303076, 0.0565679, -0.0403045, -0.126619, -0.126732, 0.146101, -0.209943, 0.117068, 0.246301, 0.00654363, 0.0632229, 0.108948, 0.110958, 0.0138581, 0.00817229, -0.197267, 0.0505428, 0.0914466, 0.0142066, 0.0101859, 0.0159471},
   {-0.0506337, 0.0182193, 0.0110646, -0.0452993, -0.0466727, 0.000355807, -0.0384195, -0.171479, 0.102824, -0.0606375, 0.259942, -0.0872932, -0.209607, -0.142605, 0.00019541, 0.153501, -0.144962, -0.0818486, -0.0490099, 0.00406918, 0.0369169, -0.038073, 0.0849571, 0.126583, -0.127964, -0.317237, -0.131608, -0.118658, 0.0251461, -0.0994083, -0.0427236, 0.089688, -0.101114, -0.0164903, 0.0156337, 0.0682156, -0.016543, -0.0737312, 0.191811, -0.0110863, -0.176301, -0.02407, -0.028001, 0.226518, 0.175721, 0.0553716, 0.0499403, -0.085751, 0.118366, -0.16696, 0.0620224, 0.106225, 0.087934, 0.0194375, -0.00761475, -0.152778, 0.000774691, 0.0795807, -0.132125, 0.0169124, 0.0237312, -0.110985, -0.0220941, -0.0819724, 0.183311, 0.110921, -0.129443, -0.155414, 0.131917, -0.120448, -0.0565624, 0.0423732, -0.189654, -0.146513, -0.316214, -0.00580499, 0.355408, 0.0613392, -0.221853, -0.0236515, -0.0819374, 0.0273423, 0.0445918, 0.117853, -0.0322622, -0.0354672, -0.12111, -0.0391914, 0.142866, -0.109375, -0.0230447, 0.199058, -0.0382341, 0.0750576, 0.0317835, 0.0559159, -0.0895886, 0.0753566, -0.0377265, 0.0266127, 0.062714, -0.0399351, 0.0489263, 0.107276, -0.1593, 0.189687, -0.00384177, 0.0358434, 0.0820551, 0.014413, -0.135657, -0.0945056, 0.16793, -0.24496, 0.136804, 0.182464, 0.071957, 0.113234, 0.0679663, 0.166414, -0.056505, 0.0386044, -0.189949, -0.00757538, 0.085717, -0.0172627, -0.0110463, 0.013099},
};

std::unordered_map<int, long> clusters = chineseWhisper(vector_XY, threshold, maxIterations);

for (auto& pointClusterPair : clusters)
{
    std::cout << pointClusterPair.second << ". {";
    for (auto& onevector : vector_XY[pointClusterPair.first])
        std::cout << onevector << ", ";
    std::cout << "}" << std::endl;
}

return 0;

}

//////////////////////result same as Hierarchical agglomerative clustering (HAC) ~19. {-0.0870341, 0.132455, 0.0377385, -0.0863609, -0.080264, -0.0696672, -0.0463324, -0.134765, 0.118001, -0.0683511, 0.323536, -0.0289626, -0.16187, -0.151928, 0.00135129, 0.128619, -0.216957, -0.104474, -0.0618603, 0.0202411, 0.0740284, -0.0655336, 0.0417513, -0.0156198, -0.0659297, -0.364725, -0.11644, -0.108196, 0.0902467, -0.0894608, -0.0497683, -0.0528107, -0.196105, -0.140476, 0.054013, 0.0430962, -0.0265678, -0.0323258, 0.173099, -0.0596527, -0.192517, 0.0505832, 0.0883283, 0.21358, 0.210763, 0.121535, 0.0396708, -0.115944, 0.166951, -0.0981052, 0.0729366, 0.112695, 0.183109, 0.0760816, -0.000555654, -0.0987974, 0.0533802, 0.133428, -0.240769, 0.00780147, 0.168464, -0.0495153, -0.0452943, -0.0277928, 0.220089, 0.104242, -0.118118, -0.211169, 0.141521, -0.143251, -0.0671872, 0.0101379, -0.147469, -0.14075, -0.236201, -0.00484477, 0.306387, 0.0919039, -0.169813, -0.0252979, -0.0849125, -0.0175008, 0.0471315, 0.0719539, -0.0357105, 0.00750187, -0.0920192, -0.0382614, 0.192626, -0.0548417, 0.0213941, 0.18122, -0.0144798, 0.0403539, 0.0107551, 0.0289004, -0.132128, 0.0720871, -0.112661, -0.00122857, -0.0280466, -0.0596347, 0.00191765, 0.097825, -0.176455, 0.173006, -0.0426155, 0.0679425, -0.0265626, -0.0447446, -0.00596849, -0.0719273, 0.0804739, -0.210111, 0.260635, 0.205839, 0.0815478, 0.0926372, 0.0731819, 0.0475103, 0.0265419, 0.000553765, -0.231507, -0.073622, 0.0136529, -0.066276, 0.093881, -0.00216521, }

~19. {-0.0992979, 0.122165, 0.0912602, -0.0321985, -0.0684462, -0.0849711, -0.0489946, -0.135503, 0.0917729, -0.0578902, 0.272745, -0.0926052, -0.136296, -0.152289, -0.0184117, 0.0929956, -0.152167, -0.0617913, -0.0333641, 0.0428432, 0.0490224, -0.0422929, 0.0884286, 0.0014897, -0.0675949, -0.408781, -0.152954, -0.114768, 0.108607, -0.109054, -0.0608561, -0.0181542, -0.151239, -0.16152, 0.00403405, 0.0566143, -0.00598553, -0.00146211, 0.182004, -0.0298069, -0.193664, 0.0537602, 0.0379817, 0.282349, 0.214286, 0.138912, 0.0153926, -0.0876147, 0.13333, -0.127702, 0.0757071, 0.116368, 0.174625, 0.0508582, 0.0332182, -0.0451843, 0.042498, 0.0887166, -0.255065, 0.0156304, 0.135325, 0.00735303, 0.0308902, -0.0187245, 0.189613, 0.0918508, -0.0912196, -0.158444, 0.146944, -0.176383, -0.0320568, 0.020041, -0.116278, -0.137768, -0.26683, -0.00472715, 0.286731, 0.127513, -0.187165, -0.0619743, -0.14029, -0.0463117, 0.0542244, 0.0365646, -0.00987529, -0.0291819, -0.0973244, -0.0714808, 0.154462, -0.0700323, 0.015624, 0.179265, 0.0213346, 0.038605, 0.000864326, 0.0487321, -0.174079, 0.0962759, -0.133794, 0.0215799, -0.0298369, -0.0343859, 0.019338, 0.126402, -0.212536, 0.225471, -0.00803165, 0.00834702, 0.00257323, -0.0130928, -0.0553833, -0.078879, 0.123541, -0.224206, 0.203897, 0.223088, 0.0462511, 0.0959692, 0.0667733, 0.0464888, 0.0130222, 0.00502837, -0.181078, -0.0887057, 0.000660131, -0.0807323, 0.0179886, 0.022814, }

~16. {-0.128572, 0.0973682, 0.0867608, -0.0376779, -0.15026, -0.067252, -0.0249867, -0.180931, 0.111005, -0.145676, 0.274965, -0.0804217, -0.239929, -0.0838986, -0.0614532, 0.223914, -0.197584, -0.168018, -0.076038, -0.00738627, 0.0597828, -0.00679871, 0.0386248, 0.00801556, -0.0688232, -0.350878, -0.0427477, -0.0272239, -0.0232097, -0.0299352, -0.034983, 0.0572654, -0.243263, -0.106614, 0.0698775, 0.106294, -0.0264911, -0.0556516, 0.192935, -0.0870283, -0.256833, -0.00153754, 0.114026, 0.205701, 0.182697, -0.0306828, 0.00809767, -0.183568, 0.133403, -0.241614, -0.00562801, 0.149465, 0.0432816, 0.0398056, -0.0312084, -0.1105, -0.00262913, 0.174927, -0.0802645, -0.014896, 0.156133, -0.111117, -0.0773021, -0.0915959, 0.206589, 0.0374244, -0.142821, -0.158457, 0.0958246, -0.0908664, -0.0418441, 0.0285839, -0.144183, -0.185416, -0.281857, 0.0175398, 0.420626, -0.0017606, -0.182465, 0.0298958, -0.0872293, 0.0373133, 0.090707, 0.134021, 0.0284169, 0.00409463, -0.102585, 0.0471895, 0.225864, -0.117086, 0.0433835, 0.236, -0.00537327, 0.0370307, 0.0499216, 0.0921245, -0.0799572, 0.0298584, -0.191353, 0.021012, 0.0330286, -0.0616043, -0.0129402, 0.0904939, -0.146981, 0.0668456, -0.0311388, 0.0485171, 0.0754309, -0.0950844, -0.0432588, -0.13074, 0.0934741, -0.171577, 0.188043, 0.177637, 0.000807306, 0.14775, 0.122888, 0.102616, 0.0162509, 0.00551085, -0.173046, -0.0234691, 0.104719, 0.00359475, 0.0193932, -0.0480963, }

~16. {-0.090799, 0.0809553, 0.0759825, -0.0463626, -0.111534, -0.0545845, -0.0859236, -0.206957, 0.137534, -0.102071, 0.251071, -0.108932, -0.180827, -0.0782948, -0.0841926, 0.228998, -0.218102, -0.134776, -0.060099, 0.0174231, 0.0375845, -0.00156465, 0.0259291, 0.00259578, -0.0714218, -0.361112, -0.0811657, -0.0958543, 0.0238057, -0.030626, -0.0661701, 0.0917842, -0.206404, -0.0817531, 0.0562123, 0.0634374, -0.0189609, -0.0629081, 0.123064, -0.101644, -0.254773, 0.0129178, 0.0808249, 0.193162, 0.205865, 0.00972574, 0.0207571, -0.144906, 0.0755426, -0.147118, -0.0300265, 0.101131, 0.0524244, 0.0166091, 0.00339021, -0.166959, 0.00409083, 0.145328, -0.113452, -0.00029328, 0.123199, -0.126382, -0.0562261, -0.074728, 0.215938, 0.0421233, -0.10298, -0.170908, 0.145482, -0.0789228, 0.0169046, 0.0310389, -0.177285, -0.197749, -0.280558, -0.0403481, 0.383077, 0.0305359, -0.175888, 0.0779589, -0.0423169, 0.0553363, 0.095131, 0.130145, 0.0314053, 0.0128694, -0.0979745, 0.00303288, 0.176901, -0.115896, 0.0479244, 0.202174, -0.077142, -0.00887056, -0.00225188, 0.0118, -0.0701373, 0.0552305, -0.131145, -0.00932551, 0.0233421, -0.0201789, 0.00118736, 0.111896, -0.124617, 0.04992, -0.00945022, 0.0786036, 0.0560023, -0.0662577, -0.00143249, -0.11028, 0.143417, -0.19958, 0.177899, 0.182281, 0.0361073, 0.13681, 0.064873, 0.0923111, -0.00864414, 0.0141113, -0.238541, 0.0172291, 0.0908509, -0.0467091, 0.0198474, -0.00433859, }

~16. {-0.0905051, 0.00163369, 0.0535583, -0.0640821, -0.0805288, -0.0890661, -0.0340162, -0.192739, 0.164495, -0.113413, 0.233835, -0.0779192, -0.189857, -0.0858655, -0.0487517, 0.147014, -0.215897, -0.103606, -0.0712985, 0.00700117, 0.0668264, -0.0235734, 0.0690326, 0.026202, -0.115898, -0.384459, -0.112881, -0.0905679, -0.0153887, 0.0114962, -0.0201105, 0.0714012, -0.183783, -0.0746448, 0.024892, 0.0457105, -0.0202484, -0.0655856, 0.200638, -0.0854433, -0.312505, -0.00825135, 0.0735555, 0.170051, 0.175302, -0.00497253, 0.00517798, -0.129615, 0.167219, -0.142599, 0.00237514, 0.138755, 0.0646658, 0.00675762, 0.00139385, -0.0837034, 0.00909007, 0.170721, -0.144759, -0.0197719, 0.133594, -0.136821, -0.0325649, -0.0840999, 0.140316, 0.0897723, -0.101888, -0.181625, 0.128187, -0.146947, -0.003121, 0.0648141, -0.162793, -0.21874, -0.270899, -0.0528614, 0.349046, 0.0430693, -0.147338, 0.0151391, -0.0933118, 0.038197, 0.138434, 0.118174, 0.0280101, 0.0494065, -0.101154, -0.0237216, 0.215073, -0.0925647, 0.0155855, 0.242506, -0.0163804, 0.0374359, 0.0312551, 0.0249686, -0.0933276, 0.0633129, -0.158089, 0.0590632, 0.0240139, -0.0138454, 0.0238764, 0.0534265, -0.127014, 0.103142, 0.00471741, 0.0667835, 0.0666634, -0.0687426, -0.047581, -0.138089, 0.12435, -0.185108, 0.148363, 0.140487, 0.0554305, 0.150784, 0.0657144, 0.0799364, -0.0527384, -0.012457, -0.229388, 0.026468, 0.105851, -0.0175102, 0.0516422, -0.0365241, }

fatalfeel commented 1 year ago

modify gpt chinese whisper the answer is same HAC, not lost cluster better than HAC https://www.mediafire.com/file/6bygrg0obzbjdup/cluster_cw.cpp

Compaile commented 1 year ago

Again the algo is not wrong. Having a connection between 2 nodes does not mean they have to be in the same cluster.

However, you can modify it a bit (j = i+1 instead of i) to make sure when there is only 1 connection you guarantee the switch in the cluster id-

for (int i = 0; i < vector_XYZ.size(); i++)
{
    for (int j = i+1; j < vector_XYZ.size(); j++)
    {
        distance = Vector3Distance(vector_XYZ[i], vector_XYZ[j]);
        count++;

        if (distance <= 0.38)
            numpair.push_back(sample_pair(i,j));
    }
}

besides that i think there is not much point in keeping this issue open?

fatalfeel commented 1 year ago

//Implement Chinese Whisper algorithm in 2 points

include

include

include

// Function to calculate the Euclidean distance between two points double calculateDistance(const std::vector& point1, const std::vector& point2) { double sum = 0.0; for (size_t i = 0; i < point1.size(); ++i) { double diff = point1[i] - point2[i]; sum += diff * diff; } return std::sqrt(sum); }

// Function to find the most common label in a cluster /int findMostCommonLabel(const std::vector& cluster) { std::unordered_map<int, int> labelCount; for (int label : cluster) { labelCount[label]++; } int mostCommonLabel = -1; int maxCount = 0; for (const auto& entry : labelCount) { if (entry.second > maxCount) { maxCount = entry.second; mostCommonLabel = entry.first; } } return mostCommonLabel; }/

// Chinese Whispers algorithm std::vector chineseWhispers(std::vector<std::vector>& vector_XY, int maxIterations, double distanceThreshold) { const size_t vecSize = vector_XY.size(); std::vector labels(vecSize); // Assign each vector_XY point a unique label initially

for (size_t i = 0; i < vecSize; ++i)
    labels[i] = i;

for (int iteration = 0; iteration < maxIterations; ++iteration) 
{
    bool bChanged = false;

    for (size_t i = 0; i < vecSize; ++i) 
    {
        int currentLabel = labels[i];
        std::vector<int> neighbors;

        // Find neighboring vector_XY points within the distance threshold
        for (size_t j = 0; j < vecSize; ++j) {
            if (i != j) {
                double distance = calculateDistance(vector_XY[i], vector_XY[j]);
                if (distance <= distanceThreshold) {
                    neighbors.push_back(labels[j]);
                }
            }
        }

        // If there are neighboring vector_XY points, reassign the label based on the most common label among neighbors
        if (!neighbors.empty()) 
        {
            //int newLabel = findMostCommonLabel(neighborLabels);
            std::vector<int> labelCounts(labels.size(), 0);
            for (auto& neighbor : neighbors)
            {
                int nbCluster = labels[neighbor];
                labelCounts[nbCluster]++;
            }

            int mostCommonLabel = labels[i];
            int maxCount        = 0;
            for (size_t i = 0; i < labelCounts.size(); ++i)
            {
                if (labelCounts[i] > maxCount) {
                    maxCount = labelCounts[i];
                    mostCommonLabel = i;
                }
            }

            if (currentLabel != mostCommonLabel) 
            {
                labels[i] = mostCommonLabel;
                bChanged = true;
            }
        }
    }

    if (!bChanged) {
        break; // Exit early if no changes were made in this iteration (converged)
    }
}

return labels;

}

int main() { std::vector<std::vector> vector_XY = { { 8.3, 8.3 },{ 1, 1 },{ 2, 2 },{ 7, 7 },{ 8, 8 },{ 12, 12 },{ 13, 13 } }; int maxIterations = 100; double distanceThreshold = 1.5;

std::vector<int> labels = chineseWhispers(vector_XY, maxIterations, distanceThreshold);

for (size_t i = 0; i < vector_XY.size(); i++)
{
    std::cout << "group " << i << std::endl;
    for (size_t k = 0; k < labels.size(); k++)
    {
        if (labels[k] == i)
        {
            std::cout << k << ". {";
            for (auto& value : vector_XY[k])
                std::cout << value << ", ";
            std::cout << "}" << std::endl;
        }
    }

    std::cout << std::endl;
}

return 0;

}

/////////////////////////////////////////////////////////////////////////////// I compare dlib-CW, Hierarchical Agglomerative Clustering(HAC), gpt-CW algorithm 200 vectors(128D), in same threshold HAC can get fewer cluster HAC and gpt-CW cluster number may different, but no 128D vector lost dlib-CW will lost some vector

fatalfeel commented 1 year ago

full source share here https://www.mediafire.com/file/pr2xdl8413cnpcw/algo_test.cpp/file

fatalfeel commented 10 months ago

//chineseWhisperClustering newest and test good

typedef struct _VECTOR128_CAMERA_T { int sortid; std::string filename; mmod_rect rect; double clarity; std::vector vec128d; }VECTOR128_CAMERA_T;

static double Vector128Distance(std::vector v0, std::vector v1) { size_t idx; double summary; double diff; double vlen;

summary = 0;
for(idx=0; idx<128; idx++)
{
    diff     = (double)v0[idx] - (double)v1[idx];
    summary += diff * diff;
}

vlen = std::sqrt(summary);

return vlen;

}

// Chinese Whisper clustering algorithm implementation. static std::vector chineseWhisperClustering(std::vector vector_Value, double thresHold, int maxIterations) { int nbCluster; int tmpCount; int maxCount; int newCluster; bool converged; //double minDist; std::vector neighbors; std::vector vIdxCluster(vector_Value.size()); // Each point starts in its own cluster with label 0, 1, 2, ..., vector_Value.size()-1. std::vector clusterCount(vector_Value.size());

for (size_t i = 0; i < vIdxCluster.size(); ++i)
    vIdxCluster[i] = static_cast<int>(i);

for (int iter = 0; iter < maxIterations; ++iter)
{
    converged = false;

    for (size_t i = 0; i < vector_Value.size(); ++i)
    {
        neighbors.clear();
        //minDist = DBL_MAX;
        for (size_t j = 0; j < vector_Value.size(); ++j)
        {
            if (j != i)
            {
                double currDist = Vector128Distance(vector_Value[j].vec128d, vector_Value[i].vec128d);
                if (currDist <= thresHold)
                {
                    neighbors.push_back(j);
                    /*if( currDist < minDist )
                    {
                        minDist = currDist;
                        neighbors.clear();
                        neighbors.push_back(j);
                    }*/
                }
            }
        }

        /*newCluster = vIdxCluster[i];
        for (auto& neighbor : neighbors)
        {
            newCluster = vIdxCluster[neighbor];
        }*/

if 1

        clusterCount.assign(vector_Value.size(), 0);
        for (auto& neighbor : neighbors)
        {
            nbCluster = vIdxCluster[neighbor];
            clusterCount[nbCluster]++;
        }

        // Update the current point's label to the most common label among its neighbors.
        newCluster  = vIdxCluster[i];
        maxCount    = clusterCount[newCluster];
        for (auto& neighbor : neighbors)
        {
            nbCluster = vIdxCluster[neighbor];
            tmpCount  = clusterCount[nbCluster];
            if (tmpCount > maxCount)
            {
                newCluster  = nbCluster;
                maxCount    = tmpCount;
            }
        }

else

        clusterCount.assign(vector_Value.size(), 0);
        for (auto& neighbor : neighbors)
        {
            nbCluster = vIdxCluster[neighbor];
            clusterCount[nbCluster]++;
        }

        newCluster  = vIdxCluster[i];
        maxCount    = clusterCount[newCluster];
        for (size_t j = 0; j < clusterCount.size(); j++)
        {
            tmpCount = clusterCount[j];
            if (tmpCount > maxCount)
            {
                newCluster  = j;
                maxCount    = tmpCount;
            }
        }

endif

        if (vIdxCluster[i] != newCluster)
        {
            vIdxCluster[i] = newCluster;
            converged = true;
        }
    }

    if ( !converged ) {
        std::cout << "        chineseWhisperClustering iter: " << iter << std::endl;
        break; // If no changes occurred, clustering has converged early.
    }
}

return vIdxCluster;

}