Page 5: Data normalisation and batch correction: Paragraph 3

davismcc / scaterPaperExtras

Discussion board for modifications to the scater paper

0 stars 0 forks source link

Page 5: Data normalisation and batch correction: Paragraph 3 #20

Closed LTLA closed 8 years ago

LTLA commented 8 years ago

(We also use the log-total counts from endogenous genes, percentage of counts from the top 100 most highly-expressed genes and percentage of counts from control genes as additional covariates.)

Why? Perhaps "as additional covariates to control for something something technical effects."

davismcc commented 8 years ago

Thanks. Added a brief clause of explanation as you suggest.