I have doubts about how to structure the input file for using it with RClone. I read the quick manuals but explanations are scarce and it is not very clear how you enter your data when you have several populations, several isolates, several MLGs, and several isolates with the same MLGs. It is not clear either if analyses should be conducted in clone corrected data or not. Apparently metadata just as pop name and isolate names should be enterer as vectors but it is not clear how to contract the input file containing these vector info and which their format is.
vcastroagudin
commented
2 years ago
Hello,
I have doubts about how to structure the input file for using it with RClone. I read the quick manuals but explanations are scarce and it is not very clear how you enter your data when you have several populations, several isolates, several MLGs, and several isolates with the same MLGs. It is not clear either if analyses should be conducted in clone corrected data or not. Apparently metadata just as pop name and isolate names should be enterer as vectors but it is not clear how to contract the input file containing these vector info and which their format is.
All help will be greatly appreciated.
Vanina Castroagudin