Simulation

[Helveg]

Describe the work done

• Finished largely the design of simulation under v4
• Reinstated the NEURON adapter as the first of the 3 simulation adapters
• Uses Neo to write simulation output

List which issues this resolves:

closes #97, closes #93

Tasks

• [ ] Added tests
• [ ] Updated documentation
  • [ ] Document interface
  • [ ] Track storage interface changes

[codecov[bot]]

Codecov Report

Merging #669 (5999cf5) into main (5ab36d8) will increase coverage by 1.63%. The diff coverage is 69.92%.

@@            Coverage Diff             @@
##             main     #669      +/-   ##
==========================================
+ Coverage   71.95%   73.58%   +1.63%     
==========================================
  Files         103      128      +25     
  Lines       14334    14505     +171     
==========================================
+ Hits        10314    10674     +360     
+ Misses       4020     3831     -189     

Impacted Files	Coverage Δ
bsb/exceptions.py	100.00% <ø> (ø)
bsb/placement/particle.py	70.23% <ø> (ø)
bsb/plotting.py	16.92% <ø> (+0.05%)	:arrow_up:
bsb/reporting.py	66.66% <ø> (ø)
tests/test_entities.py	45.45% <0.00%> (ø)
bsb/postprocessing.py	21.01% <7.69%> (ø)
bsb/cell_types.py	63.15% <20.00%> (-10.28%)	:arrow_down:
bsb/option.py	90.66% <25.00%> (-1.19%)	:arrow_down:
tests/test_neuron.py	12.68% <33.33%> (-0.32%)	:arrow_down:
bsb/simulators/arbor/cell.py	35.55% <35.55%> (ø)
... and 84 more

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