tfuji
commented
1 month ago jga_study-humIDの親子関係を確認
%ruby bin/count_relationships_file_input.rb dblink/jga_study-humID/jga_study2humID.tsv
{"id":"hum0006","frequency":4,"related_ids":["JGAS000004","JGAS000106","JGAS000146","JGAS000325"]}
{"id":"hum0027","frequency":2,"related_ids":["JGAS000024","JGAS000040"]}
{"id":"hum0032","frequency":3,"related_ids":["JGAS000026","JGAS000027","JGAS000028"]}
{"id":"hum0035","frequency":6,"related_ids":["JGAS000036","JGAS000046","JGAS000088","JGAS000188","JGAS000204","JGAS000246"]}
{"id":"hum0005","frequency":10,"related_ids":["JGAS000032","JGAS000093","JGAS000123","JGAS000166","JGAS000191","JGAS000192","JGAS000200","JGAS000201","JGAS000323","JGAS000490"]}
{"id":"hum0031","frequency":4,"related_ids":["JGAS000042","JGAS000043","JGAS000044","JGAS000045"]}
{"id":"hum0053","frequency":2,"related_ids":["JGAS000062","JGAS000176"]}
{"id":"hum0068","frequency":2,"related_ids":["JGAS000065","JGAS000349"]}
{"id":"hum0083","frequency":2,"related_ids":["JGAS000070","JGAS000488"]}
{"id":"hum0086","frequency":2,"related_ids":["JGAS000073","JGAS000107"]}
{"id":"hum0088","frequency":2,"related_ids":["JGAS000077","JGAS000096"]}
{"id":"hum0090","frequency":3,"related_ids":["JGAS000078","JGAS000079","JGAS000080"]}
{"id":"hum0091","frequency":3,"related_ids":["JGAS000082","JGAS000165","JGAS000081"]}
{"id":"hum0094","frequency":9,"related_ids":["JGAS000095","JGAS000105","JGAS000128","JGAS000113","JGAS000215","JGAS000270","JGAS000297","JGAS000360","JGAS000335"]}
{"id":"hum0096","frequency":2,"related_ids":["JGAS000090","JGAS000138"]}
{"id":"hum0103","frequency":2,"related_ids":["JGAS000109","JGAS000389"]}
{"id":"hum0014","frequency":9,"related_ids":["JGAS000114","JGAS000101","JGAS000140","JGAS000203","JGAS000327","JGAS000293","JGAS000346","JGAS000381","JGAS000414"]}
{"id":"hum0107","frequency":2,"related_ids":["JGAS000099","JGAS000218"]}
{"id":"hum0111","frequency":3,"related_ids":["JGAS000103","JGAS000141","JGAS000242"]}
{"id":"hum0113","frequency":3,"related_ids":["JGAS000119","JGAS000142","JGAS000318"]}
{"id":"hum0120","frequency":2,"related_ids":["JGAS000221","JGAS000549"]}
{"id":"hum0127","frequency":2,"related_ids":["JGAS000130","JGAS000274"]}
{"id":"hum0130","frequency":2,"related_ids":["JGAS000150","JGAS000289"]}
{"id":"hum0147","frequency":2,"related_ids":["JGAS000145","JGAS000312"]}
{"id":"hum0152","frequency":2,"related_ids":["JGAS000182","JGAS000529"]}
{"id":"hum0182","frequency":2,"related_ids":["JGAS000180","JGAS000516"]}
{"id":"hum0187","frequency":2,"related_ids":["JGAS000194","JGAS000233"]}
{"id":"hum0195","frequency":3,"related_ids":["JGAS000190","JGAS000234","JGAS000269"]}
{"id":"hum0197","frequency":8,"related_ids":["JGAS000205","JGAS000260","JGAS000316","JGAS000415","JGAS000504","JGAS000531","JGAS000530","JGAS000543"]}
{"id":"hum0200","frequency":4,"related_ids":["JGAS000202","JGAS000265","JGAS000290","JGAS000387"]}
{"id":"hum0201","frequency":6,"related_ids":["JGAS000199","JGAS000237","JGAS000256","JGAS000550","JGAS000350","JGAS000378"]}
{"id":"hum0214","frequency":3,"related_ids":["JGAS000220","JGAS000296","JGAS000486"]}
{"id":"hum0216","frequency":3,"related_ids":["JGAS000216","JGAS000244","JGAS000279"]}
{"id":"hum0257","frequency":3,"related_ids":["JGAS000263","JGAS000262","JGAS000264"]}
{"id":"hum0278","frequency":2,"related_ids":["JGAS000304","JGAS000305"]}
{"id":"hum0286","frequency":2,"related_ids":["JGAS000311","JGAS000523"]}
{"id":"hum0311","frequency":3,"related_ids":["JGAS000412","JGAS000541","JGAS000561"]}
{"id":"hum0345","frequency":2,"related_ids":["JGAS000528","JGAS000551"]}
NBDCヒトデータベースにおけるdatasetの定義を確認する必要がある。またjga-studyとjga-datasetなど同一データベースにおける異なるID体型が混在しているので、方針を確認する。 例）