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dbic / heudiconv

little helper to ease DICOM conversion to ready-to-share folder with heuristics
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Some accessions have duplicates of dicoms #1

Closed yarikoptic closed 7 years ago

yarikoptic commented 7 years ago

Since originally sub-directories did not include sequence number as a prefix:

smaug:/mnt/btrfs/dbic/inbox/DICOM/2016/10
$> ls */A000033 -l
total 0
drwxr-xr-x 1 yoh yoh 15360 Oct 18 02:47 01-anat-scout/
drwxr-xr-x 1 yoh yoh   600 Oct 18 02:47 02-anat-scout_MPR_sag/
drwxr-xr-x 1 yoh yoh   360 Oct 18 02:47 03-anat-scout_MPR_cor/
drwxr-xr-x 1 yoh yoh   360 Oct 18 02:47 04-anat-scout_MPR_tra/
drwxr-xr-x 1 yoh yoh 23040 Oct 18 02:46 05-anat-T1w/
drwxr-xr-x 1 yoh yoh 15360 Oct 18 02:55 06-fmap_run+/
drwxr-xr-x 1 yoh yoh  7680 Oct 18 02:55 07-fmap_run+/
drwxr-xr-x 1 yoh yoh 33600 Oct 18 02:41 08-func_run\=_task-1back/
drwxr-xr-x 1 yoh yoh 33600 Oct 18 02:44 09-func_run+_task-1back/
drwxr-xr-x 1 yoh yoh 33600 Oct 18 02:53 10-func_run+_task-oddball/
drwxr-xr-x 1 yoh yoh 33600 Oct 18 02:53 11-func_run+_task-oddball/
drwxr-xr-x 1 yoh yoh 23040 Oct 14 14:07 anat-T1w/
drwxr-xr-x 1 yoh yoh 15360 Oct 14 14:07 anat-scout/
drwxr-xr-x 1 yoh yoh   360 Oct 14 14:07 anat-scout_MPR_cor/
drwxr-xr-x 1 yoh yoh   600 Oct 14 14:07 anat-scout_MPR_sag/
drwxr-xr-x 1 yoh yoh   360 Oct 14 14:07 anat-scout_MPR_tra/
drwxr-xr-x 1 yoh yoh 23040 Oct 14 14:07 fmap_run+/
drwxr-xr-x 1 yoh yoh 33600 Oct 14 14:09 func_run+_task-1back/
drwxr-xr-x 1 yoh yoh 67200 Oct 14 14:11 func_run+_task-oddball/
drwxr-xr-x 1 yoh yoh 33600 Oct 14 14:08 func_run\=_task-1back/
yarikoptic commented 7 years ago

solved by https://github.com/dartmouth-pbs/heudiconv/pull/8