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dbitton / AnGeLi

AnGeLi is a tool for gene set enrichment analysis
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add MMS data #9

Closed ValWood closed 8 years ago

ValWood commented 8 years ago

From Nick's request. Apologies if this is in progress, just clearing out my pending file.

Hi Val,

As it turns out there is MMS data in Jurg's 2003 MBC paper http://www.ncbi.nlm.nih.gov/pubmed/12529438. It would be great to get this list added to Angeli.

Nick

dbitton commented 8 years ago

I quote Jurg "About MMS: Only two genes (abc1; SPAC4F10.10c) are specifically induced in MMS, the rest overlaps with CESR (Chen 2003, MBC). That’s the reason we did not include them as I guess that’s too small a list to be meaningful. Perhaps let Nick know about this."

ValWood commented 8 years ago

thanks danny val

On 28/11/2015 08:56, dbitton wrote:

I quote Jurg "About MMS: Only two genes (abc1; SPAC4F10.10c) are specifically induced in MMS, the rest overlaps with CESR (Chen 2003, MBC). That’s the reason we did not include them as I guess that’s too small a list to be meaningful. Perhaps let Nick know about this."

— Reply to this email directly or view it on GitHub https://github.com/dbitton/AnGeLi/issues/9#issuecomment-160265188.

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