check that Assertions are specified by URI and not by text string

dbmi-pitt / DIKB-Micropublication

Micropublication and Open Data Annotation for drug-drug interaction evidence synthesis

Apache License 2.0

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check that Assertions are specified by URI and not by text string #12

Closed jodischneider closed 9 years ago

jodischneider commented 9 years ago

clarithromycin_increases_auc_midazolam should be a PURL of an Assertion

Currently we have the triple
http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-data-75 mp:represents clarithromycin_increases_auc_midazolam

But clarithromycin_increases_auc_midazolam should be a PURL of an Assertion (not a text string)

rkboyce commented 9 years ago

This is a deprecated approach. We are planning to move the logical sentence for the assertion (subject, predicate, object) to within a graph implemented as a nanopublication. The idea is to connect the MP:Claim resource to a NP:Assertion resource with a new MP predicate called "hasLogicalForm". This needs to be tested and accepted by the developers of MP.

samuelrosko commented 9 years ago

This has been resolved. We use an rdfs:label on the mp:Claim and mp:formalizedAs to link it to the np:Assertion