search

dbmi-pitt / DIKB-Micropublication

Micropublication and Open Data Annotation for drug-drug interaction evidence synthesis
Apache License 2.0
7 stars 1 forks source link

Query review : FA-02 FA-03 #30

Closed ningyifan closed 9 years ago

ningyifan commented 9 years ago

Needs to be revised to use the OA link to get to the object assigned to hasSource. While fixing this, please check for some real examples where there are multiple evidence items that support/challenge a claim. We expect that this would mean multiple data and/or statements would support/challenge a claim and each would have its own OA with a hasSource.

jodischneider commented 9 years ago

In the original DIKB, we have this example that both supports and challenges: http://dbmi-icode-01.dbmi.pitt.edu/dikb-evidence/escitalopram_does_not_inhibit_cyp2d6.html

This translates to the following mp:Claim: http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-claim-270

In https://raw.githubusercontent.com/dbmi-pitt/DIKB-Micropublication/master/data/mp-graphs/inferred-graph-oa-mp.xml I see the following:

<owl:NamedIndividual rdf:about="

http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-data-223 "> 

    <mp:challenges rdf:resource="

http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-claim-270 "/> /owl:NamedIndividual

<!--

http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-statement-167 -->

<owl:NamedIndividual rdf:about="

http://purl.org/net/nlprepository/spl-ddi-annotation-poc#ddi-spl-annotation-statement-167 "> /owl:NamedIndividual

This should be a good example but needs review.

On Tue, Jul 21, 2015 at 9:29 AM, Yifan Ning notifications@github.com wrote:

Needs to be revised to use the OA link to get to the object assigned to hasSource. While fixing this, please check for some real examples where there are multiple evidence items that support/challenge a claim. We expect that this would mean multiple data and/or statements would support/challenge a claim and each would have its own OA with a hasSource.

— Reply to this email directly or view it on GitHub https://github.com/dbmi-pitt/DIKB-Micropublication/issues/30.

samuelrosko commented 9 years ago

I agree, that example should work for query FA-08, but it instead has two entries of support from that label statement rather than one support one challenges. Will have to look into.