Open yum-yab opened 10 months ago
FYI the Bioregistry only keeps metadata about ontologies, it is not creating nor maintaining ontologies itself.
There is no urgent need to parse OBO files as all OBO (Foundry, at least) ontologies are required to provide a primary RDF/XML release!
There are plenty of non obo foundry ontologies listed in Bioregistry that only have an obo flat file, eg, cellosaurus
For example the bioregistry saves it's ontologies in the
.obo
format.It would be nice to allow the parsing/loading of such files into Archivo, but currently rapper/rdflib do not support such files.
Also then the discovery process for the bioregistry needs to be adapted (add new key
download_obo
).