dchaley / deepcell-imaging

Tools & guidance to scale DeepCell imaging on Google Cloud Batch
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Write notebook to generate classification report #179

Closed dchaley closed 7 months ago

dchaley commented 7 months ago

To test correctness, we can use a sklearn classification report. This provides similar, but more data to a confusion matrix. It includes f-scores, etc.

Write a notebook that demonstrates the process. Read our selected training data, repredict the corresponding input, and generate a classification report.

dchaley commented 7 months ago

Example output:

              precision    recall  f1-score   support

       False       0.81      0.83      0.82     31733
        True       0.98      0.97      0.97    230411

    accuracy                           0.95    262144
   macro avg       0.89      0.90      0.90    262144
weighted avg       0.96      0.95      0.96    262144