Require passing in the image name. Previously, we guessed it from the filename using the directory containing the npz file. This is incorrect for QuPath project structures where the filename itself is the image name. Now, the job submission script has to decide what to call each image.
Also fix unit tests– we had forgotten to update them after adding the disks 😅
Require passing in the image name. Previously, we guessed it from the filename using the directory containing the npz file. This is incorrect for QuPath project structures where the filename itself is the image name. Now, the job submission script has to decide what to call each image.
Also fix unit tests– we had forgotten to update them after adding the disks 😅
Fixes #330
Paired with @WeihaoGe1009