dchaley / deepcell-imaging

Tools & guidance to scale DeepCell imaging on Google Cloud Batch
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Use custom h_maxima #355

Closed dchaley closed 1 month ago

dchaley commented 1 month ago

This replaces the deep_watershed's usage of h_maxima with our h_maxima, which in particular uses the fast-hybrid Cython version instead of scikit-image's version.

Relates to #350 , maybe fixes if this works :)

Paired with @WeihaoGe1009