Closed dchaley closed 1 month ago
We got a new (simpler) version of the qupath script from Brenna here: https://github.com/dchaley/deepcell-imaging/issues/293#issuecomment-2253045833
Let's incorporate it into our repo.
It does just whole cell, not also nuclear. It also seems to remove things like intensity measurements.
Future Question: how do we configure when we do/don't handle these various modes?
We got a new (simpler) version of the qupath script from Brenna here: https://github.com/dchaley/deepcell-imaging/issues/293#issuecomment-2253045833
Let's incorporate it into our repo.
It does just whole cell, not also nuclear. It also seems to remove things like intensity measurements.
Future Question: how do we configure when we do/don't handle these various modes?