I have been running the explainer on some cell types of interest and it had been working, but now trying the exact same runs and I am getting the error:
Traceback (most recent call last):
File "", line 1, in
File "D:\Dropbox\Python\env\lib\site-packages\ucdeconvolve_tools_explain.py", line 144, in deconvolve_explain
metadata, url = ucdapi.start_run_request("explain", params = params)
File "D:\Dropbox\Python\env\lib\site-packages\ucdeconvolve_api_api.py", line 661, in start_run_request
metadata = data['metadata']
TypeError: string indices must be integers
where cell_types_of_interest_mod[i] for i == 0 is 'alpha-beta t cell', where again this had previously worked!
And now seeing nothing is working, even after trying on multiple machines, trying under a new virtual environment with fresh installations of everything, etc.
I have been running the explainer on some cell types of interest and it had been working, but now trying the exact same runs and I am getting the error:
Traceback (most recent call last): File "", line 1, in
File "D:\Dropbox\Python\env\lib\site-packages\ucdeconvolve_tools_explain.py", line 144, in deconvolve_explain
metadata, url = ucdapi.start_run_request("explain", params = params)
File "D:\Dropbox\Python\env\lib\site-packages\ucdeconvolve_api_api.py", line 661, in start_run_request
metadata = data['metadata']
TypeError: string indices must be integers
in response to the run:
ucd_res = ucd.tl.explain(cur_expr, cell_types_of_interest_mod[i])
where cell_types_of_interest_mod[i] for i == 0 is 'alpha-beta t cell', where again this had previously worked!
And now seeing nothing is working, even after trying on multiple machines, trying under a new virtual environment with fresh installations of everything, etc.