Open biomendi opened 5 years ago
Hi Santiago,
Could you please send me the input file to my personal email? ddarriba (at) udc.es. It will be much faster if I can check it locally.
Best, Diego
Hi Diego,
Input files should now be in your inbox.
Thanks again and I will be waiting for your answer.
Hi Diego,
I'm very interested in how did you fix Santiago's problem because I have the same one after partition 22:
Assertion failed: (PLL_ABS(tr->likelihood - likelihood) < 0.00001), function pllEvaluateLikelihood, file evaluateGenericSpecial.c, line 1985. Abort trap: 6
Thank you so much!
Best, Susette
Hi Diego,
I have a 40 sequence alignment of length 117,579 derived from capture data (lots of missing data), a partition file with 84 subsets (computed with partitionfinder), and an ML tree inferred with fasttree. The tree has the long branch issue, which I would like to fix using ForeSeqs.
I installed ForeSeqs on my mac server and run successfully the test data. However, when I tried to use it with my data, the program did run for while (until partition 64) and then failed.
Do you have any insights about this error?
If you need a copy of the input files, please let me know.
Thanks a lot.