modeltest-ng: Cannot parse the msa Sequence 1 (Acorus) longer than expected

ddarriba / modeltest

Best-fit model selection

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modeltest-ng: Cannot parse the msa Sequence 1 (Acorus) longer than expected #17

Open Nekochef opened 6 years ago

Nekochef commented 6 years ago

Hi, I've got a problem running modeltest-ng:

modeltest-ng: Cannot parse the msa: /home/shadowstep/UNIX/Seq/matK_trim.phylip
              [910]: Sequence 1 (Acorus) longer than expected
Error: Invalid arguments

How can I fix this? Thanks!

ddarriba commented 6 years ago

Please check if the sequences have all the same length and if there is any potential strange character in any sequence (not necessarily in Acorus)

vincent-lefort commented 3 years ago

It seems this error occurs when the input MSA file is a PHYLIP interleaved formatted.