Support PHYLIP iterleaved formated MSA

ddarriba / modeltest

Best-fit model selection

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Support PHYLIP iterleaved formated MSA #45

Closed vincent-lefort closed 3 years ago

vincent-lefort commented 3 years ago

I tried to run Modeltest-ng on a PHYLIP interleaved formated file. I got the error message: modeltest-ng: Cannot parse the msa: in.phy [910]: Sequence 1 (T1) longer than expected

I converted the input MSA into a PHYLIP sequential formated file and Modeltest-ng ran succesfully.

Is there a chance for the next Modelttest-ng release to support PHYLIP interleaved formated MSA?

ddarriba commented 3 years ago

Hi Vincent,

PHYLIP interleaved was already supported in v0.1.7 in the development branch. I updated the master branch to the most recent version, so it should work now.