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Snow Leopard breaks hcluster? #25

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
On a Mac OSX 10.6 (snow leopard) machine, with Numpy and other stuff updated 
and new, 
importing hcluster leads to a segmentation fault.  Re-installing did not help.  
Any advice?

Thx!

Original issue reported on code.google.com by jwke...@gmail.com on 13 Sep 2009 at 6:50

GoogleCodeExporter commented 9 years ago
Can you try opening python or ipython in GDB with

[code]
gdb --args ipython -pylab
[/code]

then try importing then run "bt" and give me a backtrace?

Damian

Original comment by damian.e...@gmail.com on 14 Nov 2009 at 3:43

GoogleCodeExporter commented 9 years ago
I have not heard back in four months so I will assume this issue is closed.

-Damian Eads

Original comment by damian.e...@gmail.com on 16 Jan 2010 at 7:16

GoogleCodeExporter commented 9 years ago
The version of hcluster included in Macports (0.2.0) still has crashes on 
import.

Here's the gdb output:

kieran@runt:~$ gdb --args python2.6 -c "import hcluster"
GNU gdb 6.3.50-20050815 (Apple version gdb-1346) (Fri Sep 18 20:40:51 UTC 2009)
Copyright 2004 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-apple-darwin"...Reading symbols for shared
libraries .. done

(gdb) run  
Starting program: /opt/local/bin/python2.6 -c import\ hcluster
Reading symbols for shared libraries +. done

Program received signal SIGTRAP, Trace/breakpoint trap.
0x00007fff5fc01028 in __dyld__dyld_start ()
(gdb) bt
#0  0x00007fff5fc01028 in __dyld__dyld_start ()
#1  0x0000000100000000 in ?? ()
(gdb) 

Original comment by herv...@gmail.com on 21 Apr 2010 at 6:23

GoogleCodeExporter commented 9 years ago
I also tried a copy of hcluster fresh from SVN with the same results.

Original comment by herv...@gmail.com on 21 Apr 2010 at 6:27