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dean0x7d / pybinding

Scientific Python package for tight-binding calculations in solid state physics
https://pybinding.site
BSD 2-Clause "Simplified" License
188 stars 69 forks source link

can not install on windows #46

Closed yangxing844 closed 1 year ago

yangxing844 commented 1 year ago

here is the log, I don't know what is happening 

Collecting pybinding
  Using cached pybinding-0.9.5.tar.gz (1.6 MB)
  Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy>=1.12 in c:\users\yx\miniconda3\lib\site-packages (from pybinding) (1.25.2)
Requirement already satisfied: scipy>=0.19 in c:\users\yx\miniconda3\lib\site-packages (from pybinding) (1.11.1)
Requirement already satisfied: matplotlib>=2.0 in c:\users\yx\miniconda3\lib\site-packages (from pybinding) (3.7.1)
Collecting pytest>=5.0 (from pybinding)
  Using cached pytest-7.4.1-py3-none-any.whl (324 kB)
Requirement already satisfied: contourpy>=1.0.1 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (1.0.5)
Requirement already satisfied: cycler>=0.10 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (4.25.0)
Requirement already satisfied: kiwisolver>=1.0.1 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (1.4.4)
Requirement already satisfied: packaging>=20.0 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (23.0)
Requirement already satisfied: pillow>=6.2.0 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (9.4.0)
Requirement already satisfied: pyparsing>=2.3.1 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (3.0.9)
Requirement already satisfied: python-dateutil>=2.7 in c:\users\yx\miniconda3\lib\site-packages (from matplotlib>=2.0->pybinding) (2.8.2)
Collecting iniconfig (from pytest>=5.0->pybinding)
  Using cached iniconfig-2.0.0-py3-none-any.whl (5.9 kB)
Requirement already satisfied: pluggy<2.0,>=0.12 in c:\users\yx\miniconda3\lib\site-packages (from pytest>=5.0->pybinding) (1.0.0)
Requirement already satisfied: colorama in c:\users\yx\miniconda3\lib\site-packages (from pytest>=5.0->pybinding) (0.4.6)
Requirement already satisfied: six>=1.5 in c:\users\yx\miniconda3\lib\site-packages (from python-dateutil>=2.7->matplotlib>=2.0->pybinding) (1.16.0)
Building wheels for collected packages: pybinding
  Building wheel for pybinding (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [606 lines of output]
      running bdist_wheel
      running build
      running build_py
      creating build
      creating build\lib.win-amd64-cpython-311
      creating build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\chebyshev.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\constants.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\greens.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\lattice.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\leads.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\model.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\modifier.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\parallel.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\pltutils.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\results.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\shape.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\solver.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\system.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\__about__.py -> build\lib.win-amd64-cpython-311\pybinding
      copying pybinding\__init__.py -> build\lib.win-amd64-cpython-311\pybinding
      creating build\lib.win-amd64-cpython-311\pybinding\repository
      copying pybinding\repository\examples.py -> build\lib.win-amd64-cpython-311\pybinding\repository
      copying pybinding\repository\group6_tmd.py -> build\lib.win-amd64-cpython-311\pybinding\repository
      copying pybinding\repository\phosphorene.py -> build\lib.win-amd64-cpython-311\pybinding\repository
      copying pybinding\repository\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\repository
      creating build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\alias.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\collections.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\deprecated.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\fuzzy_set.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\inspect.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\kwant.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\pickle.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\structure.py -> build\lib.win-amd64-cpython-311\pybinding\support
      copying pybinding\support\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\support
      creating build\lib.win-amd64-cpython-311\pybinding\utils
      copying pybinding\utils\cpuinfo.py -> build\lib.win-amd64-cpython-311\pybinding\utils
      copying pybinding\utils\misc.py -> build\lib.win-amd64-cpython-311\pybinding\utils
      copying pybinding\utils\progressbar.py -> build\lib.win-amd64-cpython-311\pybinding\utils
      copying pybinding\utils\time.py -> build\lib.win-amd64-cpython-311\pybinding\utils
      copying pybinding\utils\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\utils
      creating build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\constants.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\lattice.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\modifiers.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\shape.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\utils.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      copying pybinding\repository\graphene\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\repository\graphene
      creating build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\conftest.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_kpm.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_kwant.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_lattice.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_leads.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_model.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_modifiers.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_parallel.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_pickle.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_results.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_shape.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_solver.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_system.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\test_wrapper.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      copying tests\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\tests
      running egg_info
      writing pybinding.egg-info\PKG-INFO
      writing dependency_links to pybinding.egg-info\dependency_links.txt
      writing requirements to pybinding.egg-info\requires.txt
      writing top-level names to pybinding.egg-info\top_level.txt
      reading manifest file 'pybinding.egg-info\SOURCES.txt'
      reading manifest template 'setup.manifest'
      no previously-included directories found matching 'cppcore\deps\catch'
      no previously-included directories found matching 'docs\_api'
      no previously-included directories found matching 'tests\failed'
      warning: no previously-included files matching '*.pyc' found anywhere in distribution
      adding license file 'license.md'
      writing manifest file 'pybinding.egg-info\SOURCES.txt'
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.kpm' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.kpm' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.kpm' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.kpm' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.kpm' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.lattice' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.lattice' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.lattice' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.lattice' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.lattice' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.parallel' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.parallel' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.parallel' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.parallel' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.parallel' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.shape' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.shape' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.shape' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.shape' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.shape' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.solver' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.solver' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.solver' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.solver' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.solver' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_data.system' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_data.system' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_data.system' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_data.system' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_data.system' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_plots.results' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_plots.results' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_plots.results' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_plots.results' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_plots.results' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.baseline_plots.system' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.baseline_plots.system' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.baseline_plots.system' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.baseline_plots.system' to be distributed and are
              already explicitly excluding 'pybinding.tests.baseline_plots.system' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      C:\Users\yx\miniconda3\Lib\site-packages\setuptools\command\build_py.py:201: _Warning: Package 'pybinding.tests.utils' is absent from the `packages` configuration.
      !!

              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pybinding.tests.utils' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.

              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pybinding.tests.utils' is explicitly added
              to the `packages` configuration field.

              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).

              You can read more about "package discovery" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

              If you don't want 'pybinding.tests.utils' to be distributed and are
              already explicitly excluding 'pybinding.tests.utils' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.

              You can read more about "package data files" on setuptools documentation page:

              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html

              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************

      !!
        check.warn(importable)
      copying tests\local.cfg -> build\lib.win-amd64-cpython-311\pybinding\tests
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\conductivity[graphene-const_potential].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\conductivity[graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\dos[graphene-const_potential].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\dos[graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\ldos[graphene-const_potential].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\ldos[graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\ldos[graphene-pristine-oversized].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\ldos[graphene-pristine].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      copying tests\baseline_data\kpm\ldos[mos2].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\kpm
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\lattice
      copying tests\baseline_data\lattice\expected[graphene-bilayer].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\lattice
      copying tests\baseline_data\lattice\expected[graphene-monolayer-4atom].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\lattice
      copying tests\baseline_data\lattice\expected[graphene-monolayer-nn].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\lattice
      copying tests\baseline_data\lattice\expected[graphene-monolayer].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\lattice
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\parallel
      copying tests\baseline_data\parallel\ndsweep.pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\parallel
      copying tests\baseline_data\parallel\sweep.pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\parallel
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\freeform.pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\polygon_expected[diamond].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\polygon_expected[pentagon].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\polygon_expected[square].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\polygon_expected[triangle90].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      copying tests\baseline_data\shape\polygon_expected[triangle].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\shape
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\dos[arpack-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\dos[feast-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\eigenvalues[arpack-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\eigenvalues[feast-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\lapack.pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\spatial_ldos[arpack-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      copying tests\baseline_data\solver\spatial_ldos[feast-graphene-magnetic_field].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\solver
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-bilayer].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-4atom-periodic-2d].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-4atom].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-alt].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-nn].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-periodic-1d-alt].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-periodic-1d].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer-periodic-2d].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      copying tests\baseline_data\system\expected[graphene-monolayer].pbz -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_data\system
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_plots
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_plots\results
      copying tests\baseline_plots\results\structure_map_plot.png -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_plots\results
      creating build\lib.win-amd64-cpython-311\pybinding\tests\baseline_plots\system
      copying tests\baseline_plots\system\system_plot.png -> build\lib.win-amd64-cpython-311\pybinding\tests\baseline_plots\system
      creating build\lib.win-amd64-cpython-311\pybinding\tests\utils
      copying tests\utils\__init__.py -> build\lib.win-amd64-cpython-311\pybinding\tests\utils
      copying tests\utils\compare_figures.py -> build\lib.win-amd64-cpython-311\pybinding\tests\utils
      copying tests\utils\fuzzy_equal.py -> build\lib.win-amd64-cpython-311\pybinding\tests\utils
      copying tests\utils\path.py -> build\lib.win-amd64-cpython-311\pybinding\tests\utils
      running build_ext
      C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py:33: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
        cmake_version = LooseVersion(re.search(r'version\s*([\d.]+)', out.decode()).group(1))
      -- Building for: NMake Makefiles
      CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
        Compatibility with CMake < 3.5 will be removed from a future version of
        CMake.

        Update the VERSION argument <min> value or use a ...<max> suffix to tell
        CMake that the project does not need compatibility with older versions.

      CMake Error at CMakeLists.txt:2 (project):
        Generator

          NMake Makefiles

        does not support platform specification, but platform

          x64

        was specified.

      CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage
      -- Configuring incomplete, errors occurred!
      -- Building for: NMake Makefiles
      CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
        Compatibility with CMake < 3.5 will be removed from a future version of
        CMake.

        Update the VERSION argument <min> value or use a ...<max> suffix to tell
        CMake that the project does not need compatibility with older versions.

      CMake Error at CMakeLists.txt:2 (project):
        Generator

          NMake Makefiles

        does not support platform specification, but platform

          x64

        was specified.

      CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage
      -- Configuring incomplete, errors occurred!
      Traceback (most recent call last):
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 73, in build_extension
          build()
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 69, in build
          check_call(["cmake", ext.sourcedir] + cmake_args, cwd=self.build_temp, env=env)
        File "C:\Users\yx\miniconda3\Lib\subprocess.py", line 413, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['cmake', 'C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21\\build\\lib.win-amd64-cpython-311', '-DPYTHON_EXECUTABLE=C:\\Users\\yx\\miniconda3\\python.exe', '-DPB_WERROR=OFF', '-DPB_TESTS=OFF', '-DPB_NATIVE_SIMD=ON', '-DPB_MKL=OFF', '-DPB_CUDA=OFF', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY_RELEASE=C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21\\build\\lib.win-amd64-cpython-311', '-A', 'x64']' returned non-zero exit status 1.

      During handling of the above exception, another exception occurred:

      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 100, in <module>
          setup(
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\__init__.py", line 107, in setup
          return distutils.core.setup(**attrs)
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\core.py", line 185, in setup
          return run_commands(dist)
                 ^^^^^^^^^^^^^^^^^^
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\core.py", line 201, in run_commands
          dist.run_commands()
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\dist.py", line 1244, in run_command
          super().run_command(command)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\dist.py", line 988, in run_command
          cmd_obj.run()
        File "C:\Users\yx\miniconda3\Lib\site-packages\wheel\bdist_wheel.py", line 325, in run
          self.run_command("build")
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\dist.py", line 1244, in run_command
          super().run_command(command)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\dist.py", line 988, in run_command
          cmd_obj.run()
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\command\build.py", line 131, in run
          self.run_command(cmd_name)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\dist.py", line 1244, in run_command
          super().run_command(command)
        File "C:\Users\yx\miniconda3\Lib\site-packages\setuptools\_distutils\dist.py", line 988, in run_command
          cmd_obj.run()
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 38, in run
          self.build_extension(ext)
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 76, in build_extension
          build()
        File "C:\Users\yx\AppData\Local\Temp\pip-install-pf38gbti\pybinding_a46e61d141a041bd978e585bdac3dd21\setup.py", line 69, in build
          check_call(["cmake", ext.sourcedir] + cmake_args, cwd=self.build_temp, env=env)
        File "C:\Users\yx\miniconda3\Lib\subprocess.py", line 413, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['cmake', 'C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21\\build\\lib.win-amd64-cpython-311', '-DPYTHON_EXECUTABLE=C:\\Users\\yx\\miniconda3\\python.exe', '-DPB_WERROR=OFF', '-DPB_TESTS=OFF', '-DPB_NATIVE_SIMD=ON', '-DPB_MKL=OFF', '-DPB_CUDA=OFF', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY_RELEASE=C:\\Users\\yx\\AppData\\Local\\Temp\\pip-install-pf38gbti\\pybinding_a46e61d141a041bd978e585bdac3dd21\\build\\lib.win-amd64-cpython-311', '-A', 'x64']' returned non-zero exit status 1.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pybinding
  Running setup.py clean for pybinding
Failed to build pybinding
ERROR: Could not build wheels for pybinding, which is required to install pyproject.toml-based projects
BertJorissen commented 1 year ago

Hi there is a known bug on Windows in Pybind11, a subpackage of Pybinding. When you have the dependencies installed using pip install scipy numpy pytest matplotlib, you can install the new development version using pip install -i https://test.pypi.org/simple/ pybinding. Please let me know if this worked. Best Bert

yangxing844 commented 1 year ago

running above command give the following error this is on linux using fresh pyenv python 3.11


  error: subprocess-exited-with-error

  × pip subprocess to install build dependencies did not run successfully.
  │ exit code: 1
  ╰─> [3 lines of output]
      Looking in indexes: https://test.pypi.org/simple/
      ERROR: Could not find a version that satisfies the requirement setuptools>=40.8.0 (from versions: none)
      ERROR: No matching distribution found for setuptools>=40.8.0
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error

× pip subprocess to install build dependencies did not run successfully.
│ exit code: 1
╰─> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip.
yangxing844 commented 1 year ago

hi, I just booted up windows, and the successfully installed pybinding, thank you!, however the linux version still can not be installed

BertJorissen commented 1 year ago

You also need the 'setuptools' package, from pip install setuptools. This is a temporary issue, as when we push to the main PyPi repo, dependencies are installed automatically. Best Bert

yangxing844 commented 1 year ago

thanks that resolved my issue