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deep-finder / cryoet-deepfinder

Macromolecules Localization and Identification in 3D Cellular Cryo-Electron Tomograms
GNU General Public License v3.0
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tomo9.mrc example file #2

Open philsmoot opened 3 months ago

philsmoot commented 3 months ago

In the example code, where can I find the "tomo9.mrc" file as in "/path/to/deep-finder/examples/analyze/in/tomo9.mrc".

I don't see that file on the "SHREC Cryo-ET 2019 Dataset: Classification in Cryo-Electron Tomograms" site found here https://dataverse.nl/dataset.xhtml?persistentId=doi:10.34894/XSKKQV)

thanks, Phil

emoebel commented 3 months ago

Hi, the file is contained in the zip folder shrec19_cryoet_full_dataset.zip Best, Emmanuel

Le ven. 7 juin 2024 à 01:28, Phil Smoot @.***> a écrit :

In the example code, where can I find the "tomo9.mrc" file as in "/path/to/deep-finder/examples/analyze/in/tomo9.mrc".

I don't see that file on the "SHREC Cryo-ET 2019 Dataset: Classification in Cryo-Electron Tomograms" site found here https://dataverse.nl/dataset.xhtml?persistentId=doi:10.34894/XSKKQV)

thanks, Phil

— Reply to this email directly, view it on GitHub https://github.com/deep-finder/cryoet-deepfinder/issues/2, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEAE4CRVT6WSTPN6OQN32GTZGDWA3AVCNFSM6AAAAABI5UH2D6VHI2DSMVQWIX3LMV43ASLTON2WKOZSGMZTSMRZHAYDSMA . You are receiving this because you are subscribed to this thread.Message ID: @.***>

philsmoot commented 3 months ago

reconstruction_model_9.mrc ?

From: emoebel @.> Date: Thursday, June 6, 2024 at 10:33 PM To: deep-finder/cryoet-deepfinder @.> Cc: Phil Smoot @.>, Author @.> Subject: Re: [deep-finder/cryoet-deepfinder] tomo9.mrc example file (Issue #2) Hi, the file is contained in the zip folder shrec19_cryoet_full_dataset.zip Best, Emmanuel

Le ven. 7 juin 2024 à 01:28, Phil Smoot @.***> a écrit :

In the example code, where can I find the "tomo9.mrc" file as in "/path/to/deep-finder/examples/analyze/in/tomo9.mrc".

I don't see that file on the "SHREC Cryo-ET 2019 Dataset: Classification in Cryo-Electron Tomograms" site found here https://dataverse.nl/dataset.xhtml?persistentId=doi:10.34894/XSKKQV)

thanks, Phil

— Reply to this email directly, view it on GitHub https://github.com/deep-finder/cryoet-deepfinder/issues/2, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEAE4CRVT6WSTPN6OQN32GTZGDWA3AVCNFSM6AAAAABI5UH2D6VHI2DSMVQWIX3LMV43ASLTON2WKOZSGMZTSMRZHAYDSMA . You are receiving this because you are subscribed to this thread.Message ID: @.***>

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