Closed ncfrey closed 3 years ago
Can we replace
!conda install -c dglteam dgl-cuda11.0 dgllife
with
!conda install -c dglteam dgl-cuda11.0
!pip install dgllife
I deprecated the conda distributions for DGL-LifeSci since 0.2.7.
Can you explain what is /content
?
"hyperparam" -> "hyperparameter"
"The hyperparam search space can be modified in the molnet python script if desired." Can you specify the exact script name(s)?
For "16 different models", it's not clear what are the 16 models as only RF and GraphConv were introduced. It's probably better to say "16 RF models with different hyperparameters".
I'm good otherwise. Great job!
Can you explain what is
/content
?
This was left in unnecessarily, I've removed it.
For "16 different models", it's not clear what are the 16 models as only RF and GraphConv were introduced. It's probably better to say "16 RF models with different hyperparameters".
Thanks for pointing this out, I've changed the text to read: After training the random forest model with 16 different hyperparameter configurations (and repeating each 3 times to collect statistics for the validation and test errors)
I've updated the tutorial to address @mufeili's comments. Thanks for the feedback!
I wrote a brief tutorial that shows how to run a MolNet benchmark in Google Colab. This was helpful to me to set up a consistent environment and run on the GPU.
If it would be helpful, I'd like to add the tutorial to the repo. Any feedback is welcome!
CCing @mufeili @rbharath