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deeptools / HiCExplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
https://hicexplorer.readthedocs.org
GNU General Public License v3.0
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can't find krbalancing module in correct matrix #540

Closed mtegtmey closed 4 years ago

mtegtmey commented 4 years ago

Hi, I'm getting this error when running hicCorrectMatrix:

wm06b-74e:~ mtegtmey$ hicCorrectMatrix correct --matrix ~/Desktop/0514d28_10000_norm.cool --correctionMethod KR --outFileName ~/Desktop/0514d28_corrected.cool Traceback (most recent call last): File "/Users/mtegtmey/miniconda3/bin/hicCorrectMatrix", line 4, in from hicexplorer.hicCorrectMatrix import main File "/Users/mtegtmey/miniconda3/lib/python3.7/site-packages/hicexplorer/hicCorrectMatrix.py", line 17, in from krbalancing import * ModuleNotFoundError: No module named 'krbalancing'

I'm using HiCExplore version 3.4.3

Thanks!

Matt

LeilyR commented 4 years ago

How did you install hicexplorer? it seems like a missing dependencies

mtegtmey commented 4 years ago

That was fast. I installed through cloning the git repo. I updated my dependencies and it seems to be working now.