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deeptools / HiCExplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
https://hicexplorer.readthedocs.org
GNU General Public License v3.0
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hicPlotDistVsCounts plot only cis #754

Closed wbszhu closed 2 years ago

wbszhu commented 3 years ago

Hi,

If I want only intra-chromosomal pairs (cis) were used to calculate P(s) curve. What should I do? or could you give more detail about the --domains. Like the format?

Thanks.