multiple enzymes and multiple overhang

deeptools / HiCExplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

https://hicexplorer.readthedocs.org

GNU General Public License v3.0

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multiple enzymes and multiple overhang #799

Open yinshiyi opened 2 years ago

yinshiyi commented 2 years ago

my processed are being killed, not sure why yet. Is there a debug portion of the output available for each run? thank you

             --restrictionSequence GAATC GAGTC GATTC GACTC GATC CTAAG CTGAG CTTAG CTCAG TTAA \
             --danglingSequence AAT AGT ATT ACT GATC TAA TGA TTA TCA TA \
             --restrictionCutFile GAATC.bed GAGTC.bed GATTC.bed GACTC.bed GATC.bed CTAAG.bed CTGAG.bed CTTAG.bed CTCAG.bed TTAA.bed \

joachimwolff commented 2 years ago

If it gets killed it usually means you have to less memory on your computer.