I have a query that I am having 2 samples (control.cool and treatment.cool) and ran hicCompareMatrix command and obtained a combined matrix file (combine.cool) and then used hiCPlotMatrix to plot this cool file with coordinates range like 8000000-9000000 and one plot with range 3000000-4000000. I have 80 coordinates like this and now I want to have a plot averaging 80 coordinates.
Hi,
I have a query that I am having 2 samples (control.cool and treatment.cool) and ran hicCompareMatrix command and obtained a combined matrix file (combine.cool) and then used hiCPlotMatrix to plot this cool file with coordinates range like 8000000-9000000 and one plot with range 3000000-4000000. I have 80 coordinates like this and now I want to have a plot averaging 80 coordinates.
can anyone please help me in this.