deeptools HiCMatrix issues

deeptools / HiCMatrix

GNU General Public License v3.0

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issues

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Release 17.2: Compatibility with 3.7

#51 lldelisle closed 6 months ago
4
ModuleNotFoundError: No module named 'importlib.metadata'

#50 lldelisle closed 6 months ago
2
Test the CI

#49 lldelisle closed 8 months ago
1
Release 17.1

#48 lldelisle closed 11 months ago
1
use of 'non-standard dependency specifiers' in setup.py and requirements.txt

#47 t-kreitler closed 11 months ago
2
Release 17

#46 lldelisle closed 1 year ago
3
Release 16 on pypi?

#45 jpecar closed 11 months ago
3
Develop

#44 joachimwolff closed 3 years ago
0
Set up CI with Azure Pipelines

#43 joachimwolff closed 3 years ago
0
Fix/fit cut intervals

#42 lldelisle closed 3 years ago
0
Revert "Fix fit cut intervals"

#41 joachimwolff closed 3 years ago
0
Fix fit cut intervals

#40 lldelisle closed 3 years ago
0
unexpected behaviour in fit_cut_intervals

#39 lldelisle closed 3 years ago
1
Develop

#38 joachimwolff closed 4 years ago
0
Fixing wrong test case

#37 joachimwolff closed 4 years ago
0
Fix 35

#36 LeilyR closed 4 years ago
8
get_chromosome_sizes() on modified matrices

#35 LeilyR closed 4 years ago
3
Develop

#34 joachimwolff closed 4 years ago
0
Feature may2020

#33 joachimwolff closed 4 years ago
0
Develop

#32 joachimwolff closed 4 years ago
2
Bug fix april2020

#31 joachimwolff closed 4 years ago
0
replacing numpy.string_ with str ensures compatibility with HiGlass

#30 dmalzl closed 4 years ago
0
using numpy.string_ for info dict generation prevents generated cooler files from usage with HiGlass

#29 dmalzl closed 4 years ago
0
Question about part of the code

#28 lldelisle closed 4 years ago
3
Develop

#27 joachimwolff closed 4 years ago
0
Patch march

#26 joachimwolff closed 4 years ago
0
no nan_bins update in fillLowerTriangle

#25 lldelisle closed 4 years ago
0
Update dev to master

#24 joachimwolff closed 4 years ago
0
surprising behaviour with cool load

#23 lldelisle closed 4 years ago
3
Change all exit to exception

#22 lldelisle closed 4 years ago
1
Get bin size when one bin

#21 lldelisle closed 4 years ago
0
Last bin with data of cool file is always nan

#20 lldelisle closed 4 years ago
2
MatrixFileHandler.load() crashes interpreter quite brutally

#19 mvdbeek closed 4 years ago
2
maybe this way?

#18 bgruening closed 5 years ago
0
Develop

#17 joachimwolff closed 5 years ago
0
reorderChromosomes

#16 LeilyR closed 5 years ago
1
add autodeploy

#15 bgruening closed 5 years ago
0
Develop

#14 joachimwolff closed 5 years ago
0
Fixing a bug related to format changes of hic2cool

#13 joachimwolff closed 5 years ago
0
Develop

#12 joachimwolff closed 5 years ago
0
Fix of the API call for cooler 0.8.2

#11 joachimwolff closed 5 years ago
0
Update to cooler 0.8.2

#10 joachimwolff closed 5 years ago
0
Homer read gzip

#9 joachimwolff closed 4 years ago
0
Develop

#8 joachimwolff closed 6 years ago
0
Develop

#7 joachimwolff closed 6 years ago
0
pyGenomeTracks error

#6 rbronste closed 6 years ago
2
Develop

#5 joachimwolff closed 6 years ago
1
Develop

#4 joachimwolff closed 6 years ago
0
HiCMatrix installation via conda requires HiCExplorer 2.1.1

#3 gtrichard closed 6 years ago
2
New tests for matrixFileHandler and hiCMatrix

#2 Rungetf closed 6 years ago
3