Open outpaddling opened 11 months ago
On FreeBSD 14, and possibly other platforms, roundup() is defined as a macro in sys/param.h. The patch below resolves compile issues:
--- libBigWig/bwValues.c.orig 2023-12-16 13:51:54 UTC +++ libBigWig/bwValues.c @@ -5,7 +5,7 @@ #include <zlib.h> #include <errno.h> -static uint32_t roundup(uint32_t v) { +static uint32_t bigwig_roundup(uint32_t v) { v--; v |= v >> 1; v |= v >> 2; @@ -346,7 +346,7 @@ static bwOverlappingIntervals_t *pushIntervals(bwOverl //Returns NULL on error, in which case o has been free()d static bwOverlappingIntervals_t *pushIntervals(bwOverlappingIntervals_t *o, uint32_t start, uint32_t end, float value) { if(o->l+1 >= o->m) { - o->m = roundup(o->l+1); + o->m = bigwig_roundup(o->l+1); o->start = realloc(o->start, o->m * sizeof(uint32_t)); if(!o->start) goto error; o->end = realloc(o->end, o->m * sizeof(uint32_t)); @@ -366,7 +366,7 @@ static bbOverlappingEntries_t *pushBBIntervals(bbOverl static bbOverlappingEntries_t *pushBBIntervals(bbOverlappingEntries_t *o, uint32_t start, uint32_t end, char *str, int withString) { if(o->l+1 >= o->m) { - o->m = roundup(o->l+1); + o->m = bigwig_roundup(o->l+1); o->start = realloc(o->start, o->m * sizeof(uint32_t)); if(!o->start) goto error; o->end = realloc(o->end, o->m * sizeof(uint32_t));
On FreeBSD 14, and possibly other platforms, roundup() is defined as a macro in sys/param.h. The patch below resolves compile issues: