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dekoning-lab / slim-tree

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Optimize fitness functions #17

Closed ebrintn closed 3 years ago

ebrintn commented 3 years ago

I have put in a little time into trying to make the fitness functions a little faster but they are still taking up way too much computation time - especially for longer genomes. Is there a way to optimize the fitness functions (perhaps by reducing the need to iterate through the whole genome)?

ebrintn commented 3 years ago

All done!

ebrintn commented 3 years ago

Found out about new way to represent nucleotides