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delt0r / msms

A coalsecent simulator with selection
www.mabs.at/ewing/msms
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Time sampled data 2 #31

Open lormond opened 10 years ago

lormond commented 10 years ago

Command line: msms 60 10000 -N 10000 -t 40 -SI tbs 1 0.0001 -Sp 0.500 -Smark -SFC -SAA tbs -SAa tbs -IT 3 1 0 20 0.02 20 0.04 20

from uniform priors for s and Ts Ts=runif(nreps,0,0.05) s=runif(nreps,0,0.1)

Error report that arises sometimes but not others: Exception in thread "main" java.lang.NullPointerException at at.mabs.coalescent.CoalescentEventCalculator.nextCoalescentSelection(CoalescentEventCalculator.java:349) at at.mabs.coalescent.CoalescentEventCalculator.nextEventSelection(CoalescentEventCalculator.java:90) at at.mabs.coalescent.CoalescentEventCalculator.calculateCoalescentHistory(CoalescentEventCalculator.java:520) at at.MSLike.run(MSLike.java:301) at at.MSLike.runThreads(MSLike.java:424) at at.MSLike.runMe(MSLike.java:191) at at.MSLike.main(MSLike.java:543) at at.MSLike.main(MSLike.java:587)