denglab / SeqSero

Salmonella serotyping from genome sequencing data
GNU General Public License v2.0
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How to use SeqSero for any other bacterial species #15

Open sekhwal opened 3 years ago

sekhwal commented 3 years ago

Hi, I am using SeqSero with the following command. However, it is showing following error. Please suggest how to solve the issue.

Running command:

python SeqSero.py -m 4 -i Salm01_scaffolds.fasta - b bwa

error:

File "SeqSero.py", line 32 print dataset[0] ^ SyntaxError: Missing parentheses in call to 'print'. Did you mean print(dataset[0])?