denimgroup / threadfix

ThreadFix is a software vulnerability management platform. This GitHub site is far out of date. Please go to www.threadfix.it for up-to-date information.
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Unable to Start on RHEL 7 #1765

Open rbecker911 opened 7 years ago

rbecker911 commented 7 years ago

I am unable to get ThreadFix to startup on RHEL 7. I have tried both the prebuilt .war file and built a copy from maven. The maven build was clean, but also did not start. The same error was shown. Error also occurs with both MySQL and HSDB.

[root@ddcsvitop01 tomcat]# java -showversion openjdk version "1.8.0_102" OpenJDK Runtime Environment (build 1.8.0_102-b14)

Tomcat: tomcat-7.0.54-2.el7_1.noarch

2016-09-16 13:41:28,475 [localhost-startStop-1] WARN org.springframework.context.support.AbstractApplicationContext (AbstractApplicationContext.java:487) - Exception encountered during context initialization - cancelling refresh attempt org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'requestMappingHandlerAdapter' defined in class path resource [org/springframework/web/servlet/config/annotation/DelegatingWebMvcConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter]: Factory method 'requestMappingHandlerAdapter' threw exception; nested exception is javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:599) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1117) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1012) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:476) at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:303) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:299) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194) at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:755) at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:759) at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:480) at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:434) at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:306) at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:106) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4973) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5467) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:632) at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1247) at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1898) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter]: Factory method 'requestMappingHandlerAdapter' threw exception; nested exception is javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:189) at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) ... 27 more Caused by: javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at javax.xml.transform.FactoryFinder.newInstance(FactoryFinder.java:187) at javax.xml.transform.FactoryFinder.find(FactoryFinder.java:264) at javax.xml.transform.TransformerFactory.newInstance(TransformerFactory.java:106) at org.springframework.http.converter.xml.SourceHttpMessageConverter.(SourceHttpMessageConverter.java:80) at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.(RequestMappingHandlerAdapter.java:180) at org.springframework.web.servlet.config.annotation.WebMvcConfigurationSupport.requestMappingHandlerAdapter(WebMvcConfigurationSupport.java:459) at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509.CGLIB$requestMappingHandlerAdapter$28() at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509$$FastClassBySpringCGLIB$$4b6babcf.invoke() at org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:228) at org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:309) at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509.requestMappingHandlerAdapter() at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) ... 28 more Caused by: java.lang.ClassNotFoundException: net/sf/saxon/TransformerFactoryImpl at java.lang.Class.forName0(Native Method) at java.lang.Class.forName(Class.java:348) at javax.xml.transform.FactoryFinder.getProviderClass(FactoryFinder.java:127) at javax.xml.transform.FactoryFinder.newInstance(FactoryFinder.java:169) ... 43 more 2016-09-16 13:41:29,596 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:94) - Shutting down scheduler. 2016-09-16 13:41:29,596 [localhost-startStop-1] INFO org.quartz.core.QuartzScheduler (QuartzScheduler.java:694) - Scheduler DefaultQuartzScheduler_$_NONCLUSTERED shutting down. 2016-09-16 13:41:29,596 [localhost-startStop-1] INFO org.quartz.core.QuartzScheduler (QuartzScheduler.java:613) - Scheduler DefaultQuartzScheduler$_NONCLUSTERED paused. 2016-09-16 13:41:29,596 [localhost-startStop-1] DEBUG org.quartz.simpl.SimpleThreadPool (SimpleThreadPool.java:328) - Shutting down threadpool... 2016-09-16 13:41:29,597 [localhost-startStop-1] DEBUG org.quartz.simpl.SimpleThreadPool (SimpleThreadPool.java:395) - Shutdown of threadpool complete. 2016-09-16 13:41:29,597 [localhost-startStop-1] INFO org.quartz.core.QuartzScheduler (QuartzScheduler.java:771) - Scheduler DefaultQuartzScheduler$_NON_CLUSTERED shutdown complete. 2016-09-16 13:41:29,597 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:97) - Successfully shut down scheduler. 2016-09-16 13:41:29,597 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:94) - Shutting down scheduler. 2016-09-16 13:41:29,597 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:97) - Successfully shut down scheduler. 2016-09-16 13:41:29,598 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:94) - Shutting down scheduler. 2016-09-16 13:41:29,598 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:97) - Successfully shut down scheduler. 2016-09-16 13:41:29,598 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:94) - Shutting down scheduler. 2016-09-16 13:41:29,598 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:97) - Successfully shut down scheduler. 2016-09-16 13:41:29,599 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:94) - Shutting down scheduler. 2016-09-16 13:41:29,599 [localhost-startStop-1] INFO denimgroup.threadfix.service.queue.scheduledjob.AbstractScheduledJobScheduler (AbstractScheduledJobScheduler.java:97) - Successfully shut down scheduler. 2016-09-16 13:41:29,625 [localhost-startStop-1] ERROR org.springframework.web.context.ContextLoader (ContextLoader.java:331) - Context initialization failed org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'requestMappingHandlerAdapter' defined in class path resource [org/springframework/web/servlet/config/annotation/DelegatingWebMvcConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter]: Factory method 'requestMappingHandlerAdapter' threw exception; nested exception is javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:599) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1117) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1012) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:476) at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:303) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:299) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194) at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:755) at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:759) at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:480) at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:434) at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:306) at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:106) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4973) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5467) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:632) at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1247) at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1898) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter]: Factory method 'requestMappingHandlerAdapter' threw exception; nested exception is javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:189) at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) ... 27 more Caused by: javax.xml.transform.TransformerFactoryConfigurationError: Provider net.sf.saxon.TransformerFactoryImpl not found at javax.xml.transform.FactoryFinder.newInstance(FactoryFinder.java:187) at javax.xml.transform.FactoryFinder.find(FactoryFinder.java:264) at javax.xml.transform.TransformerFactory.newInstance(TransformerFactory.java:106) at org.springframework.http.converter.xml.SourceHttpMessageConverter.(SourceHttpMessageConverter.java:80) at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.(RequestMappingHandlerAdapter.java:180) at org.springframework.web.servlet.config.annotation.WebMvcConfigurationSupport.requestMappingHandlerAdapter(WebMvcConfigurationSupport.java:459) at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509.CGLIB$requestMappingHandlerAdapter$28() at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509$$FastClassBySpringCGLIB$$4b6babcf.invoke() at org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:228) at org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:309) at org.springframework.web.servlet.config.annotation.DelegatingWebMvcConfiguration$$EnhancerBySpringCGLIB$$755aa509.requestMappingHandlerAdapter() at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) ... 28 more Caused by: java.lang.ClassNotFoundException: net/sf/saxon/TransformerFactoryImpl at java.lang.Class.forName0(Native Method) at java.lang.Class.forName(Class.java:348) at javax.xml.transform.FactoryFinder.getProviderClass(FactoryFinder.java:127) at javax.xml.transform.FactoryFinder.newInstance(FactoryFinder.java:169) ... 43 more