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denisecailab
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minian
miniscope analysis pipeline with interactive visualizations
GNU General Public License v3.0
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Feature/export plots
#276
tbukic
opened
2 months ago
0
Rings in Video
#275
kaylanguyen1
opened
2 months ago
4
In 3.2 When set roi for motion correction, I double click and drag a roi, click the update mask, but "No subsetting set!"
#274
zyh-cloud
opened
3 months ago
1
How to subset multiple slices of a video?
#273
cfiel
opened
3 months ago
1
Slow calcium dynamics in final processed video
#272
cfiel
opened
4 months ago
0
Cannot visualize several different values for sparse penalty parameter during spatial updates steps
#271
cfiel
opened
4 months ago
2
ContainsArrayError: path '' contains an array
#270
skisurfer13
closed
4 months ago
1
Markup and Jinja2 Error
#269
skisurfer13
closed
4 months ago
1
Storing video requires too much memory
#268
jordiabante
closed
5 months ago
7
Excessive amount of seeds being dropped in the merge step of Initialization
#267
skisurfer13
closed
5 months ago
4
No Module named Panel?
#266
cawarwick
closed
5 months ago
6
Extracting Time Series Data and Calcium Traces CSV file
#265
skisurfer13
closed
6 months ago
2
Interactive plot not playing
#263
JohnStout
opened
8 months ago
3
Some downloading issues solved with mamba
#262
JohnStout
opened
8 months ago
0
Trouble Installing Minian
#261
carlosmckinneyjr
opened
8 months ago
1
build(deps): bump jinja2 from 2.11.3 to 3.1.3 in /requirements
#260
dependabot[bot]
opened
8 months ago
0
Problem with Installing Minian
#258
JohnNan123
opened
9 months ago
4
Fixing issues with minian installation and running
#257
UlloaSeverinoLab
opened
9 months ago
0
Repo is humongous!
#255
sneakers-the-rat
opened
10 months ago
1
Issue in updating mask for motion correction
#254
halake97
opened
10 months ago
1
add logo to readme
#253
bendichter
opened
11 months ago
0
Installation issue
#252
AlexLM96
opened
11 months ago
3
VArrayViewer not displaying video, but a frozen frame.
#251
anna-teruel
closed
11 months ago
2
Errors occur every frame in the interactive video
#249
HuangLMU
closed
1 year ago
1
Finding DF/F
#248
bahaaaldin214
opened
1 year ago
2
Bokeh visualization does not work in Windows 11
#247
vsekulic
opened
1 year ago
2
Get correct frame amount for video files without nb_frames property & allow codec selection
#246
ximion
opened
1 year ago
0
corupted video during downloading
#245
leodiej
opened
1 year ago
2
Export data unavailable
#242
leodiej
opened
1 year ago
2
error loading new video
#241
leodiej
opened
1 year ago
9
Variables differ in shapes after retrieving it
#238
tracychenxy
opened
1 year ago
0
Questions about the running results
#237
lance11320
opened
1 year ago
1
Group not found
#235
Mtkostecki
opened
1 year ago
1
Error
#234
Mtkostecki
opened
1 year ago
0
Incompatible packages reinstalling Minian
#232
anna-teruel
opened
1 year ago
5
Update_spatial value error for first spatial update
#231
britttheuser
opened
1 year ago
2
ValueError: cannot reshape array of size 4238640000 into shape (28735,600,600)
#229
zz-rezaei
opened
1 year ago
5
chunk size error at CNMF>>first spatial update >> spatial update
#226
yi-yun-ho
opened
1 year ago
0
Problem with merge function
#225
krusean
opened
1 year ago
0
Adjust to run with newer dependencies
#224
ximion
opened
1 year ago
1
Motion correction issue
#221
AnneHstudent
opened
2 years ago
0
build: use mamba to install minian
#218
phildong
closed
2 years ago
1
Cells merged after 2nd spatial update
#217
ElhamGhanbarian
opened
2 years ago
1
PermissionError
#216
zz-rezaei
opened
2 years ago
0
KeyError: 'matplotlib'
#214
neurozac
opened
2 years ago
1
Unable to get C_raw variable
#212
FrancescoPaoloUlloaSeverino
opened
2 years ago
1
build(deps): bump numpy from 1.20.2 to 1.22.0 in /requirements
#210
dependabot[bot]
opened
2 years ago
0
build(deps): bump distributed from 2021.2.0 to 2021.10.0 in /requirements
#209
dependabot[bot]
opened
2 years ago
1
pin jinja2 version to <3
#207
phildong
closed
2 years ago
1
Problem with jinja2
#206
krusean
closed
2 years ago
2
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