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denisecailab / minian

miniscope analysis pipeline with interactive visualizations
GNU General Public License v3.0
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Title/label for final minian video #11

Open susiefeng opened 5 years ago

susiefeng commented 5 years ago

It might be more clear and easy to understand if the final video which will be write into local folder can have some title/label for each of those 4 things. E.g, it's helpful to know the 'raw video' here is supposed already been motion corrected, if your 'raw' is still shifting, then that will indicate you need to go back and fix something. final

phildong commented 5 years ago

any suggestion on what the labels should be? and more importantly, what color they should be? right now the movie is grayscale and making it colorful could potentially increase time consumption for generate_videos as well as disk space to store them.

susiefeng commented 5 years ago

1: Color-wise, is it possible to use black for the left 2 videos, white for the right 2? 2: just sth in mind: Top left---Raw video after preprocessing and motion correction. Top right---After background removal. Bottom left---Background (or background being subtracted out). Bottom right---Final cells

phildong commented 5 years ago

The biggest issue of this is we don't want the texts to cover up region of interest, so the titles can't be too long -- I'll be hesitant to put more than two words. Also, bottom left are not background, but a poorly defined residual. And I will be confused about what exactly "final cells" are referring to.