Hi Derek, here are the grading rubrics for the exercises and assignments of Bootcamp Day 1. You'll find that we broke up some questions into several subcomponents to make grading easier. You will be able to resubmit your work throughout bootcamp for regrading.
Questions that you have satisfactorily answered are marked by (YES). Questions with incomplete or incorrect answers are marked by (-). Additional feedback may be provided below each rubric.
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DAY 1 MORNING
Question
Description
Completion
Q2
Prepared working environment
YES
Q3
Wrangled sample metadata
YES
Q4A
Identified the two subjects with the most samples
YES
Q4B
Identified the two subjects with the fewest samples
YES
Q5A
Identified the two tissue types with the most samples
YES
Q5B
Identified the two tissue types with the fewest samples
YES
Q6A
Filtered for subject GTEX-NPJ8
YES
Q6B
Correctly identified tissue with the most samples
YES
Q6C
Discussed difference between samples of tissue from Q6B
YES
Q7A
Filtered out NA values
YES
Q7B
Correctly determined number of subjects with mean SMATSSCR score of 0
YES
Q7C
Provided additional observations/discussion about mean score distribution
YES
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DAY 1 AFTERNOON
Component
Description
Completion
Q1
Data import with read_delim
YES
Q2
Glimpse the data
YES
Q3
Subset the data to (SMGEBTCHT == "TruSeq.v1")
YES
Q4
Barplot of sample number from each tissue
YES
Q5A
Plot (histogram, density, etc.) of RINs across samples
YES
Q5B
Discussion of Q5 plot
YES
Q6A
Plot (box, violin, etc.) of RINs stratified by tissue
YES
Q6B
Discussion of Q6 plot
YES
Q7A
Plot of detected gene number per sample, stratified by tissue
YES
Q7B
Discussion of Q7 plot
YES
Q8A
Plot of ischemic time vs. RIN, stratified by tissue; adjusted point size and opacity
Hi Derek, here are the grading rubrics for the exercises and assignments of Bootcamp Day 1. You'll find that we broke up some questions into several subcomponents to make grading easier. You will be able to resubmit your work throughout bootcamp for regrading.
Questions that you have satisfactorily answered are marked by (YES). Questions with incomplete or incorrect answers are marked by (-). Additional feedback may be provided below each rubric.
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Nice bonus analyses!