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dereneaton / ipyrad

Interactive assembly and analysis of RAD-seq data sets
http://ipyrad.readthedocs.io
GNU General Public License v3.0
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baba module not updated to 0.9 version #371

Open isaacovercast opened 4 years ago

isaacovercast commented 4 years ago

ipyrad/analysis/init still says:

# from .baba import Baba as baba

And if you try: import ipyrad.analysis.baba you get

AttributeError: module 'ipyrad.analysis' has no attribute 'baba'

daniellerivera commented 4 years ago

i get the same error ipyrad v 0.9.19 using python 3.7.4

any idea when this might be updated?

isaacovercast commented 4 years ago

Hi Danielle!

At this point it's a little uncertain. I just moved to paris for a postdoc, so my time is somewhat limited. If you want to be the guinea pig I can make what is there available and you can try it out, no promises. Having an interested party to beta test and troubleshoot makes it a lot easier.

Hope all is good! -isaac

daniellerivera commented 4 years ago

@isaacovercast Hey congrats!!! Paris is exciting! I'm happy to be a trial tester! I'm prepping for a conference soon, but I have downtime to test code for the next week or so. Should I shoot you an email to start a chain?

All is great! -Danielle

isaacovercast commented 4 years ago

Sure. Sounds good.

On Wed, Dec 18, 2019 at 8:08 PM Danielle Rivera notifications@github.com wrote:

@isaacovercast https://github.com/isaacovercast Hey congrats!!! Paris is exciting! I'm happy to be a trial tester! I'm prepping for a conference soon, but I have downtime to test code for the next week or so. Should I shoot you an email to start a chain?

All is great! -Danielle

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isaacovercast commented 4 years ago

I pulled down and retrofitted the working v.0.7.30 version of baba.py, for the mean time. Everything works except the plot() function.