dereneaton / ipyrad

Interactive assembly and analysis of RAD-seq data sets
http://ipyrad.readthedocs.io
GNU General Public License v3.0
70 stars 39 forks source link

Debugging bioconda #377

Closed isaacovercast closed 1 year ago

isaacovercast commented 4 years ago

This is less an issue and more just a place to put stuff related to figuring out when the bioconda build breaks. When you push a tag a pr gets created in bioconda-recipes. The new pr will initiate a series of tests using circle-ci, including linting and testing the linux and mac builds. If any of that fails the pr gets blocked. If you go look at the PRs you will see one that's open and it'll have a little red x next to it. You can click on the pr, then choose the 'Checks' tab, and it'll show you which check failed. Then if you want even more info, you can click on the failed process and it'll show you a GIANT log file with everything it did and you can root around in there to figure out what broke.

Updating the bioconda recipe: Follow this documentation carefully to update the bioconda recipe.

isaacovercast commented 1 year ago

@BiocondaBot autobump ipyrad

isaacovercast commented 1 year ago

@BiocondaBot hello

isaacovercast commented 1 year ago

@BiocondaBot hello

isaacovercast commented 1 year ago

There is apparently a cron job that runs every hour to run biocondabot