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dereneaton / ipyrad

Interactive assembly and analysis of RAD-seq data sets
http://ipyrad.readthedocs.io
GNU General Public License v3.0
70 stars 39 forks source link

Merge exists with 1 #415

Closed miguelpmachado closed 3 years ago

miguelpmachado commented 3 years ago

Hi everyone, I'm trying run ipyrad with different conditions, but when I try merging them, the merge command always exists with 1 although it seems to worked (I think is related with this line). Is there any reason for this behaviour? I'm asking because this is breaking my script. Thanks for your attention. Best regards, Miguel

isaacovercast commented 3 years ago

Huh, that's weird. Thanks for tracking down the exact behavior in the code. I changed this to return 0 on successful merging. You can clone the repository or wait until the next ipyrad version goes up to bioconda.