How to add the ddRAD data to params.text

[AliBasuony2022]

Dear colleageus, Does any one know how to add the ddRAD data in the parameters file. I know it is a simple question, but I have tried a lot and it didn't work. for example, I tried the below. ./Ali/plate1_AliBasuony_R1.fastq.gz ./Ali/plate1_AliBasuony_R2.fastq.gz ## [2] [raw_fastq_path]: Location of raw non-demultiplexed fastq files

Kind regards, Ali

[isaacovercast]

Hello Ali, Yes, you must use the wildcard character to specify paired data '*', like this:

./Ali/plate1_AliBasuony_R*.fastq.gz

The files must also be renamed to include exactly "R1" and "R2".

Good luck

[AliBasuony2022]

Hi Isacc, Thanks so much for your prompt reply. Ali