Open aroavaron opened 5 months ago
Hello Adela,
How did you add a few samples? Did you add them at the beginning and re-run everything from step 1? If not this, what did you try?
Can you also run step 7 again and include the -d
flag and copy/paste the output message here?
Thanks, -isaac
Hi again! I added the samples to the folder including the demultiplexed/sorted fastq files (path provided in step # [4], and then, I re-run everything from step 1. I will run it again including the -d flag and share the output message here.
Is it possible that this is a memory issue?
Thanks a lot!
It isn't a memory issue, im' pretty sure. Please share the debug output with me next time it crashes.
here it's! Please, let me know if you need anything else.
Step 7: Filtering and formatting output files
[####################] 100% 0:00:22 | applying filters
[####################] 100% 0:04:25 | building arrays
Encountered an Error. Message: ValueError: not enough values to unpack (expected 2, got 1)
Parallel connection closed.
---------------------------------------------------------------------------ValueError Traceback (most recent call last)
Did you run this again with the 0.9.93 version after installing the newest version? If so let me know if it worked and please close this issue. Thanks!
Hello,
I have been running ipyrad without any problem until now. However, I added a few samples and ran it again and I'm getting the error below:
Step 7: Filtering and formatting output files [####################] 100% 0:00:22 | applying filters
[####################] 100% 0:04:25 | building arrays
Encountered an Error. Message: ValueError: not enough values to unpack (expected 2, got 1) Use debug flag (-d) for full code traceback.
I modified the job and the params files accordingly. Any suggestion about the potential source of the error?
Thanks for any suggestions and for your time! Adela