how does RSEM deal with the reads mapping to different genes?

deweylab / RSEM

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

http://deweylab.biostat.wisc.edu/rsem/

GNU General Public License v3.0

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how does RSEM deal with the reads mapping to different genes? #111

Open WTFnewlife opened 5 years ago

WTFnewlife commented 5 years ago

Hi, I want to know how does RSEM deal with the reads mapping to different genes? how does RSEM deal with the reads mapping to different genes? if RNA is incomplete, Does RSEM still applicable?

pliu55 commented 5 years ago

Hi @WTFnewlife

Just so I can understand you question correctly, would you mind elaborating more on

if RNA in incomplete