deweylab / RSEM

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
http://deweylab.biostat.wisc.edu/rsem/
GNU General Public License v3.0
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The issue about make #173

Open wbc569668815 opened 2 years ago

wbc569668815 commented 2 years ago

Dear development team: I downloadde the latest version(V1.3.3) of RSEM and used the "tar -zxvf command" to unzip. But when I use the make command, I get an error message: g++ -o rsem-simulate-reads simulation.o g++ -std=gnu++98 -Wall -I. -I. -Isamtools-1.3/htslib-1.3 -O2 -c -o parseIt.o parseIt.cpp cd samtools-1.3 && ./configure --without-curses && make -f Makefile samtools checking for x86_64-conda-linux-gnu-gcc... /home/pearlmillet/miniconda3/bin/x86_64-conda-linux-gnu-cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /home/pearlmillet/miniconda3/bin/x86_64-conda-linux-gnu-cc accepts -g... yes checking for /home/pearlmillet/miniconda3/bin/x86_64-conda-linux-gnu-cc option to accept ISO C89... none needed checking location of HTSlib source tree... htslib-1.3 checking for zlib.h... yes checking for inflate in -lz... no configure: error: zlib development files not found

The software prompts me to install "zlib1g-dev". So, I used the command ""sudo apt-get install zlib1g-dev”, but the system prompts me that zlib1g-dev is already the latest version. So I would like to ask how to solve this problem.

Looking forward to your reply. Best wishes!