rsem-run-em: RefSeq.h:85: int RefSeq::get_id(int, int) const: Assertion `pos >= 0 && pos < totLen' failed.

deweylab / RSEM

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

http://deweylab.biostat.wisc.edu/rsem/

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rsem-run-em: RefSeq.h:85: int RefSeq::get_id(int, int) const: Assertion `pos >= 0 && pos < totLen' failed. #98

Open smm19900210 opened 6 years ago

smm19900210 commented 6 years ago

Hi, i use STAR software generate T15.bam file. i use rsem to calculate expression. my command is : rsem-calculate-expression --paired-end -p 4 --no-bam-output --bam T15.bam RefIndex/TRANS.RSEM T15

it happened error: rsem-run-em: RefSeq.h:85: int RefSeq::get_id(int, int) const: Assertion `pos >= 0 && pos < totLen' failed.

xtmgah commented 5 years ago

I have the same issue here. Do you have suggestion?

penguin335 commented 2 years ago

I have the same problem, too. If I use RSEM ver1.3.1, this problem did not occur...