Open dezeraecox opened 6 years ago
Build in option to choose mean versus median normalisation of protein abundances for volcano plot normalisation.
protein_NormAR = protein_AR_summary.copy()
for col in col_list: protein_NormAR[col] = protein_AR_summary[col]/median_list[col]
logger.info(f"Protein abundances normalised to median peptide abundance: {protein_NormAR.head(5)}")`
ProteomicsUtils
Build in option to choose mean versus median normalisation of protein abundances for volcano plot normalisation.
Normalising each dataset to the Median Peptide Abundance
protein_NormAR = protein_AR_summary.copy()
for col in col_list: protein_NormAR[col] = protein_AR_summary[col]/median_list[col]
logger.info(f"Protein abundances normalised to median peptide abundance: {protein_NormAR.head(5)}")`