dfdx / Boltzmann.jl

Restricted Boltzmann Machines in Julia
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[PkgEval] Boltzmann may have a testing issue on Julia 0.4 (2015-06-30) #6

Closed IainNZ closed 9 years ago

IainNZ commented 9 years ago

PackageEvaluator.jl is a script that runs nightly. It attempts to load all Julia packages and run their tests (if available) on both the stable version of Julia (0.3) and the nightly build of the unstable version (0.4). The results of this script are used to generate a package listing enhanced with testing results.

On Julia 0.4

This issue was filed because your testing status became worse. No additional issues will be filed if your package remains in this state, and no issue will be filed if it improves. If you'd like to opt-out of these status-change messages, reply to this message saying you'd like to and @IainNZ will add an exception. If you'd like to discuss PackageEvaluator.jl please file an issue at the repository. For example, your package may be untestable on the test machine due to a dependency - an exception can be added.

Test log:

>>> 'Pkg.add("Boltzmann")' log
INFO: Cloning cache of Boltzmann from git://github.com/dfdx/Boltzmann.jl.git
INFO: Installing ArrayViews v0.6.2
INFO: Installing BinDeps v0.3.12
INFO: Installing Blosc v0.1.2
INFO: Installing Boltzmann v0.2.1
INFO: Installing Distributions v0.7.3
INFO: Installing HDF5 v0.4.17
INFO: Installing PDMats v0.3.3
INFO: Installing SHA v0.0.4
INFO: Installing StatsBase v0.6.15
INFO: Installing URIParser v0.0.5
INFO: Building Blosc
INFO: Building HDF5
WARNING: beginswith is deprecated, use startswith instead.
 in depwarn at ./deprecated.jl:62
 in beginswith at deprecated.jl:30
 in available_versions at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:116
 in package_available at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:111
 in can_provide at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:608
 in _find_library at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:451
 in satisfy! at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:738 (repeats 2 times)
 in anonymous at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:793
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in evalfile at loading.jl:175 (repeats 2 times)
 in anonymous at pkg/entry.jl:652
 in cd at ./file.jl:22
 in build! at pkg/entry.jl:651
 in build! at pkg/entry.jl:646
 in build at pkg/entry.jl:663
 in resolve at ./pkg/entry.jl:472
 in edit at pkg/entry.jl:26
 in anonymous at task.jl:365
while loading /home/vagrant/.julia/v0.4/HDF5/deps/build.jl, in expression starting on line 24
WARNING: beginswith is deprecated, use startswith instead.
 in depwarn at ./deprecated.jl:62
 in beginswith at deprecated.jl:30
 in available_versions at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:124
 in package_available at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:111
 in can_provide at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:608
 in _find_library at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:451
 in satisfy! at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:738 (repeats 2 times)
 in anonymous at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:793
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in evalfile at loading.jl:175 (repeats 2 times)
 in anonymous at pkg/entry.jl:652
 in cd at ./file.jl:22
 in build! at pkg/entry.jl:651
 in build! at pkg/entry.jl:646
 in build at pkg/entry.jl:663
 in resolve at ./pkg/entry.jl:472
 in edit at pkg/entry.jl:26
 in anonymous at task.jl:365
while loading /home/vagrant/.julia/v0.4/HDF5/deps/build.jl, in expression starting on line 24
INFO: Package database updated

>>> 'Pkg.test("Boltzmann")' log
Julia Version 0.4.0-dev+5700
Commit 147fa0b* (2015-06-29 20:31 UTC)
Platform Info:
  System: Linux (x86_64-unknown-linux-gnu)
  CPU: Intel(R) Xeon(R) CPU E5-2650 0 @ 2.00GHz
  WORD_SIZE: 64
  BLAS: libopenblas (USE64BITINT DYNAMIC_ARCH NO_AFFINITY Nehalem)
  LAPACK: libopenblas
  LIBM: libopenlibm
  LLVM: libLLVM-3.3
INFO: Computing test dependencies for Boltzmann...
INFO: Cloning cache of Logging from git://github.com/kmsquire/Logging.jl.git
INFO: Cloning cache of MNIST from git://github.com/johnmyleswhite/MNIST.jl.git
INFO: Cloning cache of Mocha from git://github.com/pluskid/Mocha.jl.git
INFO: Installing Logging v0.1.1
INFO: Installing MNIST v0.0.1
INFO: Installing Mocha v0.0.8
INFO: Building Blosc
INFO: Building HDF5
WARNING: beginswith is deprecated, use startswith instead.
 in depwarn at ./deprecated.jl:62
 in beginswith at deprecated.jl:30
 in available_versions at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:116
 in package_available at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:111
 in can_provide at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:608
 in _find_library at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:451
 in satisfy! at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:738 (repeats 2 times)
 in anonymous at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:793
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in evalfile at loading.jl:175 (repeats 2 times)
 in anonymous at pkg/entry.jl:652
 in cd at ./file.jl:22
 in build! at pkg/entry.jl:651
 in build! at pkg/entry.jl:646
 in build at pkg/entry.jl:663
 in resolve at ./pkg/entry.jl:472
 in test! at pkg/entry.jl:712
 in test at pkg/entry.jl:740
 in anonymous at pkg/dir.jl:31
 in cd at file.jl:22
 in cd at pkg/dir.jl:31
 in test at pkg.jl:71
 in process_options at ./client.jl:281
 in _start at ./client.jl:405
while loading /home/vagrant/.julia/v0.4/HDF5/deps/build.jl, in expression starting on line 24
WARNING: beginswith is deprecated, use startswith instead.
 in depwarn at ./deprecated.jl:62
 in beginswith at deprecated.jl:30
 in available_versions at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:124
 in package_available at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:111
 in can_provide at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:608
 in _find_library at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:451
 in satisfy! at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:738 (repeats 2 times)
 in anonymous at /home/vagrant/.julia/v0.4/BinDeps/src/dependencies.jl:793
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in evalfile at loading.jl:175 (repeats 2 times)
 in anonymous at pkg/entry.jl:652
 in cd at ./file.jl:22
 in build! at pkg/entry.jl:651
 in build! at pkg/entry.jl:646
 in build at pkg/entry.jl:663
 in resolve at ./pkg/entry.jl:472
 in test! at pkg/entry.jl:712
 in test at pkg/entry.jl:740
 in anonymous at pkg/dir.jl:31
 in cd at file.jl:22
 in cd at pkg/dir.jl:31
 in test at pkg.jl:71
 in process_options at ./client.jl:281
 in _start at ./client.jl:405
while loading /home/vagrant/.julia/v0.4/HDF5/deps/build.jl, in expression starting on line 24
INFO: Building Mocha
Running `g++ -fPIC -Wall -O3 -shared -fopenmp -o libmochaext.so im2col.cpp pooling.cpp`
INFO: Testing Boltzmann
Warning: could not import Base.@math_const into Distributions
ERROR: LoadError: LoadError: LoadError: LoadError: LoadError: LoadError: LoadError: UndefVarError: @math_const not defined
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in reload_path at ./loading.jl:157
 in _require at ./loading.jl:69
 in require at ./loading.jl:55
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in reload_path at ./loading.jl:157
 in _require at ./loading.jl:69
 in require at ./loading.jl:52
 in include at ./boot.jl:254
 in include_from_node1 at ./loading.jl:133
 in include at ./boot.jl:254
 in include_from_node1 at loading.jl:133
 in process_options at ./client.jl:305
 in _start at ./client.jl:405
while loading /home/vagrant/.julia/v0.4/Distributions/src/constants.jl, in expression starting on line 6
while loading /home/vagrant/.julia/v0.4/Distributions/src/Distributions.jl, in expression starting on line 252
while loading /home/vagrant/.julia/v0.4/Boltzmann/src/rbm.jl, in expression starting on line 2
while loading /home/vagrant/.julia/v0.4/Boltzmann/src/core.jl, in expression starting on line 2
while loading /home/vagrant/.julia/v0.4/Boltzmann/src/Boltzmann.jl, in expression starting on line 15
while loading /home/vagrant/.julia/v0.4/Boltzmann/test/testrbm.jl, in expression starting on line 2
while loading /home/vagrant/.julia/v0.4/Boltzmann/test/runtests.jl, in expression starting on line 2
==============================[ ERROR: Boltzmann ]==============================

failed process: Process(`/home/vagrant/julia/bin/julia --check-bounds=yes --code-coverage=none --color=no /home/vagrant/.julia/v0.4/Boltzmann/test/runtests.jl`, ProcessExited(1)) [1]

================================================================================
INFO: Removing Logging v0.1.1
INFO: Removing MNIST v0.0.1
INFO: Removing Mocha v0.0.8
ERROR: Boltzmann had test errors
 in error at ./error.jl:21
 in test at pkg/entry.jl:746
 in anonymous at pkg/dir.jl:31
 in cd at file.jl:22
 in cd at pkg/dir.jl:31
 in test at pkg.jl:71
 in process_options at ./client.jl:281
 in _start at ./client.jl:405

>>> End of log
IainNZ commented 9 years ago

https://github.com/JuliaStats/Distributions.jl/issues/388